Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00046 ATGAAGGATGTACAGACGGCTTTGCATGCGCAGCTTGTTGGAGCAAACAGATGGGCCTATTGTAATAAACCCATCAATACAAATTATTCAGTTGCAAGCTGGGAAATCCCGACGATTAAGGTAGTAGGCTGGCTCGTGAAGTTGGGCATAAGGGTGGTGGTTTACAGTGGAGACCAGGATGCAAAAATTCCATTCATAGGAACTCGACGTTTGGTGAGGAAATTAGCTGAAGAATTGAAACTCAAAGTAACAACGGAGTACACACCCTGGTTTGTGGGTGAAAAGCTGCAGGTTGGAGGGTGGATAGAAGAGTATGGGAAATGGTTAAGTTATGCAGTGATAAGGGGGGCTTCCCATGTAGCCCCGGCCACTCAACCAAAGAGGGCATTTATGCTGTTTGATGCCTTCCTTCAAGGAAAACTACTTCCTATCCCCCAACACTGA 444 0.4617 MKDVQTALHAQLVGANRWAYCNKPINTNYSVASWEIPTIKVVGWLVKLGIRVVVYSGDQDAKIPFIGTRRLVRKLAEELKLKVTTEYTPWFVGEKLQVGGWIEEYGKWLSYAVIRGASHVAPATQPKRAFMLFDAFLQGKLLPIPQH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00046 147 Pfam Serine carboxypeptidase 2 139 IPR001563 GO:0004185|GO:0006508
Pral4838g00046 147 ProSitePatterns Serine carboxypeptidases, histidine active site. 109 126 IPR033124 GO:0004185
Pral4838g00046 147 Gene3D alpha/beta hydrolase 1 142 IPR029058 -
Pral4838g00046 147 SUPERFAMILY alpha/beta-Hydrolases 2 142 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00046 Pral-Chr4838 320776 330281 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00046 4 142 Calmodulin-binding Proteins AT2G22960 26.619 3.06e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00046 K16297 - gmx:100819443 169.088