Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00041 ATGTCGCCGCGACCATTTTCTATGGTTGCAACAATATTATTTGTTGTTGCACAAATATTTGTGACTGCAATTTCAGTTTCAGAAGATGATAAGATCAGCAGTTTGCCGGGGCAGCCGCCGGTGAAGTTCCAGCAATATGCCGGTTACATTACCGTCGACGACAAGCAGCAGAGAGCTCTGTTTTACTACTTTGCAGAAGCAGAAGTAGACCCTGCTTCCAAGCCCCTGGTTCTCTGGTTGAATGGAGGGCCTGGCTGTTCATCTCTTGGAGCTGGAGCTTTCGTTGAGCATGGTCCTTTCAAACCGACCGAAAATGGTCTAGTAAAGAATGATTACAGCTGGAACAAAGAGGCAAATATGCTATACCTGGAATCACCAGCTGGAGTTGGTTTCTCTTACTCTGCCAACAAATCCTTCTATCGCTTTATCGATGATGAAATTACAGCAAAGGATAGTCTTGTTTTCCTTCAGCGTTGGTTCAATAAGTTTCCTCAGTACAAGAATAACGATTTCTTTATCACCGGAGAAAGCTATGGAGGCCATTATGTTCCTCAACTTGCGCAGCTGATTGTTCAAACTAAGACTCCGTTCAATCTCAAAGGGATCGCAATAGGGAACCCTCTGTTAGAGTTTAACACTGATTTCAACTCAAGAGGAGAATATTTTTGGTCGCATGGACTAATATCAGATCTGGCTTACGAGAGCTTGACGACGACATGTAACTACTCCCAAATCAGGAGGGAAGCTCAAAGCGGAAGTCTCACTCCAGCTTGTGCAGGAGTTGGCAAACTATTGTCAAGCGAAATTGGTAAATTCGTCGATACCTACGACGTCACTGCCGATGTCTGCTTGTCTACCATAGATCAACAATCTTTAGTGTTAAGCCAATTGCAAGAGACGCAAAAAATAGATGTTTGTGAAGAAGACAAGACACATAATTACCTGAACAGGAAAGACGTGCAGCAAGCTCTTCATGCTAAACTCGTAGGACTCTCCACATGGTCTGTTTGTAGCGATGTTGTGAAATATGATATGCAGAATTTAGAGATACCAACAATTCCTATTCTTGGGAAACTTGTTGAGTCAGGCCTTCGAGTTCTTGTCTATAGTGGGGATCAAGATTCGGTGATTCCACTAATTGGGTCGCGAGCTCTGGTGAATGCACTGGCCAGGGAAATTAGATTCAATACGACAATGCCCTACAGAGCTTGGTTTGAAGGCAAACAGGTTGCGGGGTGGACACAAGTGTATGGGGACATTTTGTCATACGCCACAATAAGAGGGGCGGCTCATGAAGCTCCGTTTTCACAACCAGAGAGATCACTTGTGCTATTCAAAGCATTTGTGGAAGGCAAACCACTTCCTGAATTCTCTTCATGA 1380 0.4413 MSPRPFSMVATILFVVAQIFVTAISVSEDDKISSLPGQPPVKFQQYAGYITVDDKQQRALFYYFAEAEVDPASKPLVLWLNGGPGCSSLGAGAFVEHGPFKPTENGLVKNDYSWNKEANMLYLESPAGVGFSYSANKSFYRFIDDEITAKDSLVFLQRWFNKFPQYKNNDFFITGESYGGHYVPQLAQLIVQTKTPFNLKGIAIGNPLLEFNTDFNSRGEYFWSHGLISDLAYESLTTTCNYSQIRREAQSGSLTPACAGVGKLLSSEIGKFVDTYDVTADVCLSTIDQQSLVLSQLQETQKIDVCEEDKTHNYLNRKDVQQALHAKLVGLSTWSVCSDVVKYDMQNLEIPTIPILGKLVESGLRVLVYSGDQDSVIPLIGSRALVNALAREIRFNTTMPYRAWFEGKQVAGWTQVYGDILSYATIRGAAHEAPFSQPERSLVLFKAFVEGKPLPEFSS 459
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00041 459 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Pral4838g00041 459 Gene3D - 306 341 - -
Pral4838g00041 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Pral4838g00041 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Pral4838g00041 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Pral4838g00041 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 421 434 IPR001563 GO:0004185|GO:0006508
Pral4838g00041 459 Gene3D - 352 451 - -
Pral4838g00041 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 438 IPR001563 GO:0004185|GO:0006508
Pral4838g00041 459 FunFam Carboxypeptidase 352 451 - -
Pral4838g00041 459 Pfam Serine carboxypeptidase 36 451 IPR001563 GO:0004185|GO:0006508
Pral4838g00041 459 FunFam Carboxypeptidase 25 455 - -
Pral4838g00041 459 SUPERFAMILY alpha/beta-Hydrolases 33 455 IPR029058 -
Pral4838g00041 459 Gene3D alpha/beta hydrolase 26 285 IPR029058 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral4838g00041 Pral-Chr4838 295611 299043 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00041 314 454 Calmodulin-binding Proteins AT2G22960 29.787 5.83e-19 82.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00041 K16297 - gmx:100805028 740.725