Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00038 ATGGGACTCTGTCATGGAAAACCTATTGAAATCTCACAAACTCATGGAGAAAACCCATTATATCCCGATGACAAGGACGGGCTTCCAAAAATTCGAACCCCCAAATCCTCAAACTTCCCCTTTTACAGCCCAAGTCCCTTGCCAAGTCTGTTCAAGAACTCACCGGCAAATTCAAGTGTGAGCTCAACTCCTTTGCGCATTTTCAAACGCCCATTCCCTCCTCCTTCACCGGCAAAGCACATTCGGGCATTGCTCGCTCGCCGGCATGGTTCTGTGAAGCCAAACGAGGCCTCTATCCCTGAGGGAGGCGAATGCGAGATTGGGTTGGATAAGAACTTCGGGTTTTCGAAGCAGTTCGCTGCTCACTATGAACTTGGAGAAGAGGTGGGTCGCGGGCACTTTGGGTATACTTGCTCCGCCAAGGGAAAGAAAGGCAGCTTGAAGGGACTAGATGTGGCCGTCAAAGTCATTCCAAAATCCAAGATGACAACAGCAATTGCTATAGAGGATGTACGGAGGGAAGTCAGGATATTGCGGGTTCTTACAGGACATGAGAACCTAGTGCAATTCTATGAAGCCTATGAAGACGATGAAAATGTTTATATAGTTATGGAGTTGTGCAAAGGAGGTGAGCTGCTGGATAGGATTCTTTCCAGGGGCGGGAAGTACTCGGAAGAGGATGCCAAGGTTGTCATGATTCAGATATTAAGTGTGGTGGCCTTCTGTCATCTGCAGGGTGTGGTTCATCGTGATCTCAAGCCAGAGAATTTTCTTTTTACGTCTAAGGACGAAAACTCCAGATTGAAGGCAATTGATTTTGGACTGTCTGACTATGTGAAGCCAGATGAGAGGTTGAATGATATTGTAGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCATATGGGACAGAAGCAGACATGTGGAGCATAGGGGTAATTGCTTATATTCTTTTATGTGGAAGCCGGCCCTTTTGGGCTCGGACAGAATCTGGCATATTTCGTGCTGTCCTGAAGACAGATCCAAGTTTCGATGATGCTCCTTGGCCTTCTTTATCGGCTGATGCAATAGATTTTGTGAAGAGGCTGTTGAATAAGGATTATCGTAAAAGATTAACTGCAGCTCAGGCTCTCTGTCATCCTTGGCTGGCTAATCATCATGATGACTTGAAGATACCTTTTGATATGATAATCCTCAGACTTGTTAGATCTTACATATCCTCATCTTCTTTACGCAAATCAGCATTAGGGGCTCTCGCAAAGACATTAACAGTACCTCAGCTAGCATATCTCAGAGAACAATTTACACAGTTAGGGCCAAACAAAAGTGGATTTATTTCCATGCAGAACTTTAAGACGGCTGTTTCAAGAAGCTCCACTGAGGCCACAAAGGATTCACGGGTCTTAGATTATGTGAGCATGGTTAGTTCTATCCAATACAGGAAATTAGATTTTGAGGAATTTTGTGCTGCTGCTATAAGCGTGCACCAGCTAGAGGGAACGGAGAGCTGGGAGCAACATGCAAGAAGGGCTTATGAACTGTTTGAAAAGGATGGGAATCGACCAATTATGATTGAAGAGCTTGCCTCGGAACTAGGGCTTAGCCCGTCTGTACCTGTTCATGTGGTTCTCCAAGATTGGATAAGACACTCGGATGGAAAGCTCAGTTTCTTAGGATTTGTGAGACTTCTGCACGGACCTTCTTCCCGCGCAATTCACAAGGCATAA 1734 0.4521 MGLCHGKPIEISQTHGENPLYPDDKDGLPKIRTPKSSNFPFYSPSPLPSLFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGGECEIGLDKNFGFSKQFAAHYELGEEVGRGHFGYTCSAKGKKGSLKGLDVAVKVIPKSKMTTAIAIEDVRREVRILRVLTGHENLVQFYEAYEDDENVYIVMELCKGGELLDRILSRGGKYSEEDAKVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSRLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKTDPSFDDAPWPSLSADAIDFVKRLLNKDYRKRLTAAQALCHPWLANHHDDLKIPFDMIILRLVRSYISSSSLRKSALGALAKTLTVPQLAYLREQFTQLGPNKSGFISMQNFKTAVSRSSTEATKDSRVLDYVSMVSSIQYRKLDFEEFCAAAISVHQLEGTESWEQHARRAYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGPSSRAIHKA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00038 577 SUPERFAMILY Protein kinase-like (PK-like) 121 450 IPR011009 -
Pral4838g00038 577 Gene3D Phosphorylase Kinase; domain 1 116 212 - -
Pral4838g00038 577 Gene3D - 408 565 - -
Pral4838g00038 577 Gene3D - 426 495 - -
Pral4838g00038 577 SUPERFAMILY EF-hand 419 567 IPR011992 -
Pral4838g00038 577 FunFam CDPK-related kinase 3 115 287 - -
Pral4838g00038 577 FunFam Calcium-dependent protein kinase SK5 295 390 - -
Pral4838g00038 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Pral4838g00038 577 CDD STKc_CAMK 122 384 - -
Pral4838g00038 577 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Pral4838g00038 577 PANTHER SERINE/THREONINE-PROTEIN KINASE 110 553 - -
Pral4838g00038 577 SMART serkin_6 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4838g00038 577 FunFam CDPK-related kinase 1 116 211 - -
Pral4838g00038 577 Gene3D Transferase(Phosphotransferase) domain 1 213 407 - -
Pral4838g00038 577 ProSiteProfiles Protein kinase domain profile. 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4838g00038 577 Pfam Protein kinase domain 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4838g00038 577 FunFam CDPK-related kinase 1 423 495 - -
Pral4838g00038 577 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Pral4838g00038 577 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00038 Pral-Chr4838 255615 260136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00038 35 574 EF-hand Containing Proteins AT3G50530 70.466 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral4838g00038 Pkinase 2.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00038 K13412 - cave:132162604 995.342