Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00034 ATGCCTTACCTTGTCCGAGAGAAACTATTTATTGGTGATATCAGTGACGCTGCGGCAATCCTTCAAAATGGTAGCGATGAAATCACGCATATTTTATCGGTTCTTACCTCTGCTTCAATATCATTCTTTTCCGAATGGCGAAGTAGCCTAACGATCCCGGCGAAGGAAATTAAGAAGGTATATGTGGGTGGTGATCATGTTGGTGCTCCTGATGATGACTTGGGTGATATATCAAGGAGTCCGTTGTCACCGGCGAACCTTTTGTACTCGTTGGAATATGCAGGTAAGGATTTGAAGTTGGTCAGGATGGCTGTCCCTCTGAGGGATACAGAAAATGAAAATTTGTTGGACTACTTGGATGTTTGCCTTAATTTTATTGATCGAAGTAGGAAAGATGGTTCTGTTCTGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCAATCATTACAGCATATCTGATGAGATCTGAACATCTATCTCAAGAAGGTAAGAATTATAACTCGGGGGCGAGAATAGACAGTTCTAAACTTGGAGCTGATCCTGGCATGCCTGTTAGTGTTGCTTCAGAAGTAGAAGGAGCTCCAAGAGCCAGAAATAATCATAGTCCTACATATCGCTGTAAAAAGTGTCGGCGTGTAGTTGCATTGAAGGAACATGTTGTAGACCATGTTCCAGGTGAAGGTGATGCATCAAGCGAGTGGCAGAAGTGGAGAAGTGACAGCCTGTTTAACAAATGCAATGAATATGAGTGTTCTTCCATATTTATTGAGCCACTTCAATGGATGAAAGCAGTTGAGGAAGGTGCATCGGAGGGGAAGTTGAACTGTGCCCACTGTGACGCCCGCTTGGGAAACTTCAATTGGTTTGGCATACAATGCAGCTGCGGAAGCTGGATATCCCCAGCCTTTCAGATCCACAAGTGCCGAGTGGATGCAAGCCCTATCTAA 951 0.4437 MPYLVREKLFIGDISDAAAILQNGSDEITHILSVLTSASISFFSEWRSSLTIPAKEIKKVYVGGDHVGAPDDDLGDISRSPLSPANLLYSLEYAGKDLKLVRMAVPLRDTENENLLDYLDVCLNFIDRSRKDGSVLVHCFAGVSRSAAIITAYLMRSEHLSQEGKNYNSGARIDSSKLGADPGMPVSVASEVEGAPRARNNHSPTYRCKKCRRVVALKEHVVDHVPGEGDASSEWQKWRSDSLFNKCNEYECSSIFIEPLQWMKAVEEGASEGKLNCAHCDARLGNFNWFGIQCSCGSWISPAFQIHKCRVDASPI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00034 316 Pfam Dual specificity phosphatase, catalytic domain 99 161 IPR000340 GO:0008138|GO:0016311
Pral4838g00034 316 ProSitePatterns Tyrosine specific protein phosphatases active site. 137 147 IPR016130 GO:0016311|GO:0016791
Pral4838g00034 316 PIRSF DUSP12 90 169 IPR016278 GO:0006470|GO:0008138
Pral4838g00034 316 PIRSF DUSP12 3 46 IPR016278 GO:0006470|GO:0008138
Pral4838g00034 316 PIRSF DUSP12 171 316 IPR016278 GO:0006470|GO:0008138
Pral4838g00034 316 SMART dsp_5 1 181 IPR020422 GO:0006470|GO:0008138
Pral4838g00034 316 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 161 IPR029021 -
Pral4838g00034 316 Gene3D Protein tyrosine phosphatase superfamily 1 173 IPR029021 -
Pral4838g00034 316 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 161 IPR000387 GO:0016311|GO:0016791
Pral4838g00034 316 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 160 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00034 Pral-Chr4838 243002 247132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00034 100 156 Protein tyrosine phosphatase (PTP) family AT3G06110 43.103 2.25e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00034 K14819 - qsa:O6P43_010054 461.455