Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00011 ATGGGAATGGCCTGTGAGTCCCGATTTCACGTGTTGGCCGTCGATGACAGCCTAATCGACCGGAAGCTTATTGAGAGGCTCCTCAAAACCTCCTCCTATGAAGTTACCACCGTCGATTCCGGTAGCAAGGCTTTAGAGTTTTTGGGTTTGCGTGACAATGATCAGACCGATCCTAATACACCTTCAGTGTCTCCTCACAGTGATCAGGAAGTGGATGTGAACCTTGTTATTACAGACTACTGTATGCCTGGCATGACTGGCTATGACTTACTCAAGAGAATCAAGGAATCTTCGTCTCTGAGAAACATACCAGTGGTGATTATGTCATCCGAAAATGTGCCTTCCAGGATTAGCAAATGCCTAGAAGAAGGGGCAGAGGAATTTTTCTTGAAACCAGTGAAGCCAGCAGATCTGCATAGGCTTAGACCCCATATGATGAAGACCCAGAAATTGAAGGATCAAGCTCAAAAAAGAGATGGAAAGCTTGAAACCCCAGAGATTCAACTAGCACCACAACCTCTGGCAGAACAACAACATCAACAATCAGTGCAGATAGTCAATACTAACAAGAGGAAAACCGTGGAAGAGGGGCTTTCGCTTGAAACTGATAGGACAAGAACAAGATTCAATGGCATAGCCACTATGGTCTGA 651 0.4531 MGMACESRFHVLAVDDSLIDRKLIERLLKTSSYEVTTVDSGSKALEFLGLRDNDQTDPNTPSVSPHSDQEVDVNLVITDYCMPGMTGYDLLKRIKESSSLRNIPVVIMSSENVPSRISKCLEEGAEEFFLKPVKPADLHRLRPHMMKTQKLKDQAQKRDGKLETPEIQLAPQPLAEQQHQQSVQIVNTNKRKTVEEGLSLETDRTRTRFNGIATMV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00011 216 SMART REC_2 9 142 IPR001789 GO:0000160
Pral4838g00011 216 CDD REC_typeA_ARR 11 141 - -
Pral4838g00011 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 192 IPR045279 GO:0009736
Pral4838g00011 216 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
Pral4838g00011 216 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Pral4838g00011 216 SUPERFAMILY CheY-like 8 161 IPR011006 -
Pral4838g00011 216 Gene3D - 10 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00011 Pral-Chr4838 120758 122591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00011 1 216 Response Regulator Gene Family AT3G57040 61.925 7.69e-91 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4838g00011 Response_reg 7.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00011 K14492 - tcc:18598779 298.13