LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4836g00046	ATGGGTAGTAGAACAGTGAATACTAAGACCGACAACAGTAACAAGTTTGCGAACGGCATGCCGAGTTACGCTCCGCCGCTGCCTACTTCTTCCTCCATGGGTACGGAAGGAACTTCTGTTCTTCCTTCCCGAATGTCTGAATTTGGAGGCATTGATCAGTCTTTCGGATTACGTGTGGAGGATGCTATCAATCTTAGCCGAAATCCTGTATTCAATCAAATGAAGTCAAATAACCAGCCTCTGGGTGTTGACGTTCATTTTGGCGCTTTAAATAAGACATTACCACTGCAAAATGACTCAAATTCCAATCTGGCTTCTACATCTGGTGGCCAGCGTGAGAACTGGGGGGAGTCTAACATGGCAGATGCAAGCCCAAGGACTGACACTTCAACAGATGATACAGATGATAAAAATCAAAGGTCTGAGAGGGGTCAACTAGTTGTTGGGGCTTCTGATTCCAGCGACAGATCAAAAGATAAAACAGATCAAAAGACACTACGGCGTCTAGCTCAAAATCGTGAGGCTGCTAGGAAAAGTCGGCTACGAAAAAAGGCATATGTGCAGCAATTAGAAAGTAGCAGGCTGAAACTGACTCAACTTGAGCAGGAGCTCCAACGAGCCCGCCAGCAGGGTATATTTATTTCAAGTATGGGAGATCAATCTCATTCAATGAGCGGAAATGGTGCAATGACCTTTGATGTGGAGTATGCACGTTGGTTAGAAGAACATAACCGGCAGATAAATGAGCTGAGGGCTGCAGTCAATTCTCATGCTGGAGATGTAGAACTTCGGACAATTGTTGAAAACGTTATGACGCACTATGAAGAGATTTTCAGGCTCAAGGGTGCTGCAGCCAAAGCTGATGTCTTCCACATACTATCTGGAATGTGGAAAACACCAGCTGAGAGATGTTTCATGTGGATTGGAGGCTTTCGCTCATCTGAGCTTCTCAAGCTTCTTGGAACCCATTTGGAGCCATTGACAGAGCAACAGTTGATGAACATTTACAGCTTGCAACAGTCATCCCAACAGGCTGAAGATGCGCTGTCCCAAGGAATGGATGCATTACAACAATCACTAGCTGAGACTTTGGCTAATGAGTCATCCACCCCATCAGGGCCTTCAGGGAATGTGGCAAACTATATGGGGCAGATGGCTATGGCCATGGGAAAGCTGGGTACTCTCGAGGGGTTTCTTCGGCAGGCTGACAATCTGCGACAGCAAACATTACAACAGATGCTGCGGATATTAACCACGAGGCAGTCGGCTCGAGCTCTTCTTGCGATAAGTGATTATTTCTCCAGGCTACGAGCCCTGAGTTCGCTGTGGCTTGCCAGGCCGAGGGAATGA	1350	0.4689	MGSRTVNTKTDNSNKFANGMPSYAPPLPTSSSMGTEGTSVLPSRMSEFGGIDQSFGLRVEDAINLSRNPVFNQMKSNNQPLGVDVHFGALNKTLPLQNDSNSNLASTSGGQRENWGESNMADASPRTDTSTDDTDDKNQRSERGQLVVGASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSMGDQSHSMSGNGAMTFDVEYARWLEEHNRQINELRAAVNSHAGDVELRTIVENVMTHYEEIFRLKGAAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLGTHLEPLTEQQLMNIYSLQQSSQQAEDALSQGMDALQQSLAETLANESSTPSGPSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE	449

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4836g00046	449	MobiDBLite	consensus disorder prediction	1	42	-	-
	Pral4836g00046	449	Gene3D	-	163	217	-	-
	Pral4836g00046	449	SUPERFAMILY	Leucine zipper domain	164	207	IPR046347	GO:0003700\|GO:0006355
	Pral4836g00046	449	Pfam	Seed dormancy control	246	320	IPR025422	GO:0006351\|GO:0043565
	Pral4836g00046	449	Coils	Coil	183	210	-	-
	Pral4836g00046	449	MobiDBLite	consensus disorder prediction	94	166	-	-
	Pral4836g00046	449	Pfam	bZIP transcription factor	164	204	IPR004827	GO:0003700\|GO:0006355
	Pral4836g00046	449	MobiDBLite	consensus disorder prediction	128	142	-	-
	Pral4836g00046	449	FunFam	BZIP family transcription factor	163	212	-	-
	Pral4836g00046	449	SMART	brlzneu	160	223	IPR004827	GO:0003700\|GO:0006355
	Pral4836g00046	449	MobiDBLite	consensus disorder prediction	94	127	-	-
	Pral4836g00046	449	Coils	Coil	240	260	-	-
	Pral4836g00046	449	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	167	182	IPR004827	GO:0003700\|GO:0006355
	Pral4836g00046	449	MobiDBLite	consensus disorder prediction	1	45	-	-
	Pral4836g00046	449	PANTHER	TRANSCRIPTION FACTOR TGA9	109	449	-	-
	Pral4836g00046	449	ProSiteProfiles	DOG1 domain profile.	229	446	IPR025422	GO:0006351\|GO:0043565
	Pral4836g00046	449	CDD	bZIP_HBP1b-like	164	216	-	-
	Pral4836g00046	449	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	162	206	IPR004827	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4836g00046	Pral-Chr4836	347156	351777	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4836g00046	120	449	bZIP Transcription Factor Family	AT3G12250	77.341	0.0	512

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Pral4836g00046		DOG1	2.3e-32	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4836g00046	K14431		-	qsa:O6P43_010042	673.7