Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4836g00035 ATGGCGCCAAAAACAATGCCTTCGTCTCCAATCCGTATCGGTAACTGCGAGATTCTCGTTGAGGCCAAAAGTTTCACCTGCAAGTCGGATTCAAATGGCCTCCAGATTTCTCTTCCAGGAAGGGGGAAGATTAAAGTATCAGTTGTGAAAGGCGAAGTTACGACTAAAGGAAATGATTCTGAGAATTTTAAGCTTGAAGATAGAGATCATAAATTCGTCCTTGTTAATCCTAAAGATGCTGACGGCACTACCAAATCCTACCTGCAGGAAGTATTGCAGATGTATATGACAGAACTTCCTGGAATGAATTATGCTGCGAATACTGGAAAACAATCAAAATTTCTTGAGAGATGCGTAACTAATGGAAAATATCGTACGCTGCTTCTGAAATCTGGTTCTGTTGGAAATTCTGGAAAGGTTATAGCTGCTATCACATATCAAATAGTCCCTGCAGATACAGAGTATGCAGAGATCCCACTTGCAGCGGTCAGTGCAATCTATCAACGCAAGGGTCTTGGTCATATGTTGTTTGTAGAGCTACGGAAGAGATTTCAAGATGTTGGCATTCGTTCAATTTTCTGCTGGGGAGACAAAGAATCTGAAGGGTTTTGGGTTAAACAGGGTTTTATATCAATAGCAGAGGTGGACACCAAAGGTAGAGCTCGCAAGTTACCTATAAAAGCTGATATTCGTAAAGCATTATGCTTTCCTGGTGGTTCTACACTCATGATTTTCCATCTAAGGATGGGATTTTCAGCTGACGCTACTAACTCTATGAAGTGTCTTCCCTCACAACAACGTCAGAATTACTTGACATTTGGAAATGACAAGAACGACCAGCTTAAATTTACAGGACAGTTACACATTGATTTGAATCTTTCAAACAACTCTACTGATAGAACAGATAATATGGAAACTAGTCATCCCAAGGCTTTGGTGAATGATGGATTTTCAAAAGAATCTGATGAATTGAGCGATGGTGAAACACCACCCGCTGTTGCAGGACTTGCAAACGATGAAGTTGATGCTGAAATGAAGGATTGTTCTAATTCCACAAAAGGTGCAAAGAGGACCTGGGAAGCCTCTTTGTCATCCTTAAAGTCAAAAAGAGTGAAAGGTTGCCATTTAGTTGATGATAGATCTGAGTCTAGCTGGGGTTTCGTGTCAGAGGTTGATAGGACTAATTCTTGTTTTGTGGGATGCTCATGGGGTGTTTTGAGCGGAAAAAGTTCAGCAGAGCTCCCATATGGTGACTCTTTGATTGTCCAAGAAAAGAATTCTGAGAAACTCAAAGGGGATTATTTAGATTTAGAAGCTCAAGTCAACAATGAACAGCTATCAACTAAACAATGCTTTAGAATCATGCTGATGAATATTGCTGATGATGCTAAGAAAATGCACCTTACAAAGGTAATTGAAGCCCTTGGTGGCACTGTTACCTCTGAAGGAAGCATGACCACACATATTGTCACAGGCAAAGTGAGGAAAACTTTGAATTTCTGCACTGCCCTCTGCTCAGGGGCATGGGTGGTCTCATCAGATTGGTTAAAAGAAAGCTGTCGTGAAGGCAAATTTATTGATGAGTTGGCTTACATATTAGATGACAAGGATTACCTATTGAAGTACAGATCTGATTTAAAAAGTGCAGTTTTCCGTGCAAAAGCCAACCCCCGAGCTTTATTCAAGGGGTACAACGTGTGCATTGCAGAGCATGTTCAACCTCCTGCTAAAACACTATCTGCAATTGTGAGCTCTGCTGGTGGCAATGTTATTCGTGGGTTGAAGAAAGTAAATGAAACATCCTCAACCATTTTTGTGACATGTGAAGAAGATATGGAAGAAGCAATGGTAGCTGCAAAGAAGGGGATCCGAACTTTCAGTAGTGAGTGGTTTATGAACTGTGTCATGAGACAAGAACTTGACATGGGGGCCTTTCAGTTTGCAGAGTCCTTATGA 1956 0.4105 MAPKTMPSSPIRIGNCEILVEAKSFTCKSDSNGLQISLPGRGKIKVSVVKGEVTTKGNDSENFKLEDRDHKFVLVNPKDADGTTKSYLQEVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSGSVGNSGKVIAAITYQIVPADTEYAEIPLAAVSAIYQRKGLGHMLFVELRKRFQDVGIRSIFCWGDKESEGFWVKQGFISIAEVDTKGRARKLPIKADIRKALCFPGGSTLMIFHLRMGFSADATNSMKCLPSQQRQNYLTFGNDKNDQLKFTGQLHIDLNLSNNSTDRTDNMETSHPKALVNDGFSKESDELSDGETPPAVAGLANDEVDAEMKDCSNSTKGAKRTWEASLSSLKSKRVKGCHLVDDRSESSWGFVSEVDRTNSCFVGCSWGVLSGKSSAELPYGDSLIVQEKNSEKLKGDYLDLEAQVNNEQLSTKQCFRIMLMNIADDAKKMHLTKVIEALGGTVTSEGSMTTHIVTGKVRKTLNFCTALCSGAWVVSSDWLKESCREGKFIDELAYILDDKDYLLKYRSDLKSAVFRAKANPRALFKGYNVCIAEHVQPPAKTLSAIVSSAGGNVIRGLKKVNETSSTIFVTCEEDMEEAMVAAKKGIRTFSSEWFMNCVMRQELDMGAFQFAESL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4836g00035 651 SUPERFAMILY BRCT domain 552 640 IPR036420 -
Pral4836g00035 651 ProSiteProfiles BRCT domain profile. 454 533 IPR001357 -
Pral4836g00035 651 CDD NAT_SF 136 195 - -
Pral4836g00035 651 ProSiteProfiles BRCT domain profile. 556 640 IPR001357 -
Pral4836g00035 651 SMART BRCT_7 446 523 IPR001357 -
Pral4836g00035 651 SMART BRCT_7 558 638 IPR001357 -
Pral4836g00035 651 CDD BRCT_PAXIP1_rpt6_like 560 641 - -
Pral4836g00035 651 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 74 231 - -
Pral4836g00035 651 Gene3D - 70 224 - -
Pral4836g00035 651 SUPERFAMILY BRCT domain 453 535 IPR036420 -
Pral4836g00035 651 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 444 533 IPR001357 -
Pral4836g00035 651 Pfam Acetyltransferase (GNAT) family 136 209 IPR000182 GO:0016747
Pral4836g00035 651 Gene3D BRCT domain 438 557 IPR036420 -
Pral4836g00035 651 Gene3D BRCT domain 558 650 IPR036420 -
Pral4836g00035 651 MobiDBLite consensus disorder prediction 294 332 - -
Pral4836g00035 651 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 90 216 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4836g00035 Pral-Chr4836 266432 273433 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pral4836g00035 RTT107_BRCT_5 6e-07 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4836g00035 - - pcin:129289715 1087.02