Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4836g00034 ATGGCGCCAAAAACAATGCCTTCGTCTCCAATCCGTATCGGTAACTGCGAGATTCTCGTTGAGGCCAAAAGTTTCACCTGCAAGTCGGATTCAAATGGCCTCCAGATTTCTCTTCCAGGAAGGGGGAAGATTAAAGTATCAGTTGTGAAAGGCGAAGTTACGACTAAAGGAAATGATTCTGAGAATTTTAAGCTTGAAGATAGAGATCATAAATTCGTCCTTGTTAATCCTAAAGATGCTGACGGCACTACCAAATCCTACCTGCAGGAAGTATTGCAGATGTATATGACAGAACTTCCTGGAATGAATTATGCTGCGAATACTGGAAAACAATCAAAATTTCTTGAGAGATGCGTAACTAATGGAAAATATCGTACGCTGCTTCTGAAATCTGGTTCTGTTGGAAATTCTGGAAAGGTTATAGCTGCTATCACATATCAAATAGTCCCTGCAGATACAGAGTATGCAGAGATCCCACTTGCAGCGGTCAGTGCAATCTATCAACGCAAGGGTCTTGGTCATATGTTGTTTGTAGAGCTACGGAAGAGATTTCAAGATGTTGGCATTCGTTCAATTTTCTGCTGGGGAGACAAAGAATCTGAAGGGTTTTGGGTTAAACAGGGTTTTATATCAATAGCAGAGGTGGACACCAAAGGTAGAGCTCGCAAGTTACCTATAAAAGCTGATATTCGTAAAGCATTATGCTTTCCTGGTGGTTCTACACTCATGATTTTCCATCTAAGGATGGGATTTTCAGCTGACGCTACTAACTCTATGAAGTGTCTTCCCTCACAACAACGTCAGAATTACTTGACATTTGGAAATGACAAGAACGACCAGCTTAAATTTACAGGACAGTTACACATTGATTTGAATCTTTCAAACAACTCTACTGATAGAACAGATAATATGGAAACTAGTCATCCCAAGGCTTTGGTGAATGATGGATTTTCAAAAGAATCTGATGAATTGAGCGGTGCGTTTTCTCCTGATGGTGAAACACCACCCGCTGTTGCAGGACTTGCAAACGATGAAGTTGATGCTGAAATGAAGGATTGTTCTAATTCCACAAAAGGTGCAAAGAGGACCTGGGAAGCCTCTTTGTCATCCTTAAAGTCAAAAAGAGTGAAAGGTTGCCATTTAGTTGATGATAGATCTGAGTCTAGCTGGGGTTTCGTGTCAGAGGTTGATAGGACTAATTCTTGTTTTGTGGGATGCTCATGGGGTGTTTTGAGCGGAAAAAGTTCAGCAGAGCTCCCATATGGTGACTCTTTGATTGTCCAAGAAAAGAATTCTGAGAAACTCAAAGGGGATTATTTAGATTTAGAAGCTCAAGTCAACAATGAACAGCTATCAACTAAACAATGCTTTAGAATCATGCTGATGAATATTGCTGATGATGCTAAGAAAATGCACCTTACAAAGGTAATTGAAGCCCTTGGTGGCACTGTTACCTCTGAAGGAAGCATGACCACACATATTGTCACAGGCAAAGTGAGGAAAACTTTGAATTTCTGCACTGCCCTCTGCTCAGGGGCATGGGTGGTCTCATCAGATTGGTTAAAAGAAAGCTGTCGTGAAGGCAAATTTATTGATGAGTTGGCTTACATATTAGATGACAAGGATTACCTATTGAAGTACAGATCTGATTTAAAAAGTGCAGTTTTCCGTGCAAAAGCCAACCCCCGAGCTTTATTCAAGGGGTACAACGTGTGCATTGCAGAGCATGTTCAACCTCCTGCTAAAACACTATCTGCAATTGTGAGCTCTGCTGGTGGCAATGTTATTCGTGGGTTGAAGAAAGTAAATGAAACATCCTCAACCATTTTTGTGACATGTGAAGAAGATATGGAAGAAGCAATGGTAGCTGCAAAGAAGGGGATCCGAACTTTCAGTAGTGAGTGGTTTATGAACTGTGTCATGAGACAAGAACTTGACATGGGGGCCTTTCAGTTTGCAGAGTCCTTATGA 1971 0.4115 MAPKTMPSSPIRIGNCEILVEAKSFTCKSDSNGLQISLPGRGKIKVSVVKGEVTTKGNDSENFKLEDRDHKFVLVNPKDADGTTKSYLQEVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSGSVGNSGKVIAAITYQIVPADTEYAEIPLAAVSAIYQRKGLGHMLFVELRKRFQDVGIRSIFCWGDKESEGFWVKQGFISIAEVDTKGRARKLPIKADIRKALCFPGGSTLMIFHLRMGFSADATNSMKCLPSQQRQNYLTFGNDKNDQLKFTGQLHIDLNLSNNSTDRTDNMETSHPKALVNDGFSKESDELSGAFSPDGETPPAVAGLANDEVDAEMKDCSNSTKGAKRTWEASLSSLKSKRVKGCHLVDDRSESSWGFVSEVDRTNSCFVGCSWGVLSGKSSAELPYGDSLIVQEKNSEKLKGDYLDLEAQVNNEQLSTKQCFRIMLMNIADDAKKMHLTKVIEALGGTVTSEGSMTTHIVTGKVRKTLNFCTALCSGAWVVSSDWLKESCREGKFIDELAYILDDKDYLLKYRSDLKSAVFRAKANPRALFKGYNVCIAEHVQPPAKTLSAIVSSAGGNVIRGLKKVNETSSTIFVTCEEDMEEAMVAAKKGIRTFSSEWFMNCVMRQELDMGAFQFAESL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4836g00034 656 Gene3D - 70 224 - -
Pral4836g00034 656 ProSiteProfiles BRCT domain profile. 561 645 IPR001357 -
Pral4836g00034 656 Gene3D BRCT domain 443 562 IPR036420 -
Pral4836g00034 656 MobiDBLite consensus disorder prediction 323 344 - -
Pral4836g00034 656 CDD NAT_SF 136 195 - -
Pral4836g00034 656 ProSiteProfiles BRCT domain profile. 459 538 IPR001357 -
Pral4836g00034 656 Pfam Acetyltransferase (GNAT) family 136 209 IPR000182 GO:0016747
Pral4836g00034 656 SMART BRCT_7 451 528 IPR001357 -
Pral4836g00034 656 SMART BRCT_7 563 643 IPR001357 -
Pral4836g00034 656 CDD BRCT_PAXIP1_rpt6_like 565 646 - -
Pral4836g00034 656 Gene3D BRCT domain 563 655 IPR036420 -
Pral4836g00034 656 SUPERFAMILY BRCT domain 556 645 IPR036420 -
Pral4836g00034 656 SUPERFAMILY BRCT domain 458 540 IPR036420 -
Pral4836g00034 656 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 74 231 - -
Pral4836g00034 656 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 90 216 IPR016181 -
Pral4836g00034 656 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 449 538 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4836g00034 Pral-Chr4836 266432 273436 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pral4836g00034 RTT107_BRCT_5 6.1e-07 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4836g00034 - - pcin:129289715 1080.86