Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4836g00027 ATGGCAAAGTGGAAGTGCTGGTTCGGATGGGTGCAAAGGCTCTTCACTCCTGAGTCAAAAGCCAAAAAGCCGAAGAAATGGGGATGGAGTCTTCGAAGGTTTAAGCTCAGACAATGTCCTACAATTACAGCACCAAATAGAGCACTTACTAAAGCAAAAGAAGAGCAGAGAAAGCATGCTTTGACAGCGGCTATTGCAACAGCAGCTGCTGCAGAAGCTGCTCTTGCTGCCGCTCATGCTGCTGCTGAGGTTGTCAGGCTAACTGGTTCTTCCCGTTCCTATTCTTATCTATCCAATGGCAATCGGAACTTGGCTGCCACTAAAATTCAAAGCGCATACCGTGGACATCTTGCTAGAAAAGCATTAAGAGCATTGAAGGGAGTTGTGAGACTTCAAGCTATAGTTCGTGGTCAAGCTGTGAGGCGTCAAATGTTCTGTACTTTGAAGCATTTGCCTTCAGGTGCAAGAGAGACGGTAGAAATATATGAAAGAAACAGTCATACTGCAGAAAAAAGCAACAAGAATGACAAGAGCAATCAGTTTCCAAGGCAGAAAAAGAAGTTGGAAGAGAAGGAGATTAAGGAGAAATTCTATCCTGATTGCCATGGTCAATTGACTTGGGATTGCAGCTTGCATTCAAAAGAAGACATAGAAGCCATATGGTTGAGAAAACAAGAGGCCACTATCAGAAGAGAACGCATGAAACAGTATTCCTTCTCACACAGGGAGAGAAAAAATTCCCACATGACAGAAGAATATGGGCCCCCTAAGGAATTTGGAAGAGAGAGCTGCCGTACTCTAGGACAATGGCTGCAGGAAGAAACACGTAACAGGGATGCCTCTCATAAACCAGATCTTCTCTCAAACCTTATCACAACAGACTTGCATGGTCCAACACAAGTCTCACTGAAGAGCGCGAAAAGAGAAGAGTCACAGGAAGGATTGATTTCACAAATTTCACTGCCAAGGAAATCATTTTCTCACGTAAAGAAAGTGTCACTTGCAGATGACAGTTCCGTGCCAAATTCTCCAGTTTTCCCCACTTACATGGCTGCGACGGAATCTGCCAGGGCAAAGGCAAGATCGATAAGCACACCAAGGCAAAGAACAGAGTTTCTGGAATTATGCCCCAATCAGAGTGAGCCTCACAAGGAGGGTATTTCTCTTTGGTCTTCTCGTTATGGTGCGCCTGCCAGCACCAATAGAAACAATGAGGTTTTTTGGCAGAGCTGTCAGAGTGCTGATCACCATCATTATCATTAG 1263 0.4473 MAKWKCWFGWVQRLFTPESKAKKPKKWGWSLRRFKLRQCPTITAPNRALTKAKEEQRKHALTAAIATAAAAEAALAAAHAAAEVVRLTGSSRSYSYLSNGNRNLAATKIQSAYRGHLARKALRALKGVVRLQAIVRGQAVRRQMFCTLKHLPSGARETVEIYERNSHTAEKSNKNDKSNQFPRQKKKLEEKEIKEKFYPDCHGQLTWDCSLHSKEDIEAIWLRKQEATIRRERMKQYSFSHRERKNSHMTEEYGPPKEFGRESCRTLGQWLQEETRNRDASHKPDLLSNLITTDLHGPTQVSLKSAKREESQEGLISQISLPRKSFSHVKKVSLADDSSVPNSPVFPTYMAATESARAKARSISTPRQRTEFLELCPNQSEPHKEGISLWSSRYGAPASTNRNNEVFWQSCQSADHHHYH 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4836g00027 420 MobiDBLite consensus disorder prediction 166 185 - -
Pral4836g00027 420 MobiDBLite consensus disorder prediction 238 259 - -
Pral4836g00027 420 SMART iq_5 101 123 IPR000048 GO:0005515
Pral4836g00027 420 PANTHER IQ-DOMAIN 5-RELATED 4 397 - -
Pral4836g00027 420 Pfam Protein of unknown function (DUF4005) 338 379 IPR025064 -
Pral4836g00027 420 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Pral4836g00027 420 Gene3D - 99 151 - -
Pral4836g00027 420 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Pral4836g00027 420 Pfam IQ calmodulin-binding motif 105 123 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4836g00027 Pral-Chr4836 204692 207100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4836g00027 1 392 IQD Protein Family AT5G03960 44.472 4.12e-77 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4836g00027 - - gmx:100800767 454.907