Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4836g00014 ATGGAGAGTCTGTTGAAAGATTTCGTTATCGAGCACAAGAAACCATCTATTGAAGCTTCGAAGCGATGGAGATCCGCCGTGGCGTTGGTAAAGAACCACCGCAGACGCTTCCGCATGGTCCCAGATCTCCAGAAACGTTCCGAAGCTGAACAAACAAGGAAGCTAATTCAGGATAAAGTTCGACTTGCTCTCTTTGTTCAAAAGGCAGCACTGCACTTTATTAGCGCAGGTGGTCCAGCTCAAAACCAAGAGGGAATCACAATTGCCCGGGGTATGTACGATGGTTTAGGAATTATACTCAGTGTGCTTTTGGTAGTCACTGTTACTTCTGTTAGTGACTACCAGCAATCCTTACAGTTCAGGGCTTTAGACAACGAGAAGAAGAAAATCTTCGTCCATGTCGTTAGAAACAAAAGAAGACAAAAGATATCAATTTATGACGTGGTAGTCGGAGATATTGTTTATCTGGCAACTGGAGATCAAGTTCCAGCTGATGGGATTTACATATCTGGATATAGCTTGTTGGTTGATGAATCTAGCTTGACAGGTGAGAGCGAACCAGTAAATGTGCATGAAGACAAACCATTTCTTCTTTCAGGAACCAAAGTGCAAGATGGCCAAGGGAAAATGTTAGTGACAGGCGTTGGCATGAGGACTGAATGGGGAAAACTAATGGAAACTTTGAACGAAGGGGGAGAAGATGAGACCCCATTGCAAGTAAAATTAAATGGGGTTGCTACAATTATTGGTAAGATTGGTTTGACTTTCGCAGTGCTGACATTTTTGGTGCTAACAACAAGGTTTTTGGTGGAAAAGGCAATTCATGGTGATATTACTCAATGGTCATCGAATGATGCAATAAAGCTGCTAAACTTTTTTGCTATTTCTGTTACAATAATAGTTGTTGCTGTTCCAGAAGGATTACCTTTGGCGGTGACACTTAGCTTAGCTTTTGCAATGAAAGAATTAATGAACGAAAGGGCACTTGTGAGGCATCTTTCTGCGTGTGAGACAATGGGTTCAGCCAGTTCCATTTGCACAGATAAGACAGGGACATTAACCACTAACCATATGGCGGTTGATAAAATATGGGTATGTGAAAAATCCATGGAAATAAAAGGCAATGAAAGTGGAACTGAACTTAAAGAAGAGATATCTGAAGGAGTTCTAGACGTCCTTCTGCAAGCTATATTTCAAAATACTTCTTCTGAAGTAGTTAAGGATAGAGATGGCAAGAACACAATACTGGGAACACCAACAGAATCGGCATTATTGGAATTTGGCTTGCTTTTGGGTGGTGATTTTGATGCCCAGCGCAGATATTATAGGATACTTGAGATTGAACCCTTTAATTCAGTTCGAAAGAAGATGTCAGTTCTTGTGGATCTTCCTGAAGGAGGAGGGACACGAGCTTTCTGCAAAGGTGCATCAGAGATAATATTACAAACGTGTGACAAGTTTATTGATTGCAATGGAGAAACCATTAATCTTGTTGAAGGCCCAGCAAAGAATATTTCTGATGTTATAAACAATTTCGCCTCGGAAGCTTTAAGAACTCTTTGTTTGGCTGTGAAAGATATAAATGAAAACCAAGAGAAAACAAGTATCCCTGATAATGGCTACACACTTATAGCCATTGTAGGAATCAAAGATCCTGTGCGCCCTGAGGTCAAGAACGCCGTCCAAACTTGTTTAGCAGCCGGAATATCAGTTCGTATGGTCACTGGTGATAACATACATACAGCTAAGGCCATAGCAAAAGAATGTGGCATCCTCACCGAGGATGGTATAGCCATAGAAGGAGGAGAATTTCGAAACTTGTCGCCTGAACAAATAAAGCATTTGATTCCAAGAATCCAGGTCATGGCACGGTCCTTGCCGCTTGATAAGCATACTTTGGTATCCCATCTGAGGAATACGTTCGGTGAAGTCGTTGCTGTTACAGGCGATGGAACCAACGATGCTCCGGCACTGCATGAAGCAGATATTGGACTTGCCATGGGAATCGCTGGAACTGAGGTTGCCAAACAAAATGCAGATGTGATCATAATGGATGATAACTTCAACACAATTGTGAGAGTGGCCAGGTGGGGACGGGCGGTATACTTGAACATTCAAAAATTTGTCCAGTTTCAGTTAACAGCAAATGTTGTTGCTCTTGTCATCAACTTTGTTTCTGCATGCATCACAGGATCTACGCCACTAACAGCTCTGCAGTTACTATGGGTGAACATGATTATGGACACTCTGGGGGCTCTGGCCCTAGCCACTGAGCCTCCTCATGATGGGCTTATGAGAAGACCCCCAGTTGCCAAGGGGGCAACTTTTATCACCAAAACCATGTGGAGGAATATCATGGGACAAAGTATATATCAGTTAATTGTCCTTGGCGTTCTCAATTTTGATGGCAAGAGGCTTCTCAGAATTACCGGTGCATCAAATGCAACTTTTGTCCTCAACACTCTGATATTCAACTCCTTTGTTTTTTGCCAGGTGTTCAATGAGATAAACAGCAGAGATATAGAAAAGATAAACGTGTTCAGAGGCATAACTAAGAGCTGGTTATTTATAGGGATAATTTTCCTAACTGTGGGATTTCAAGTAATCATAGTTGAGTTTCTGGGCAAATTTGCTAGCACAGTGCCTCTGAGCTGGAAACTCTGGTTACTCAGTATTGTGATTGGAGCAATCAGCATGCCAATATCTGCCATTGTCAAGTGCATCCCAATTGAAAGAGATGCAATAATATTCCAACATCATGATGGTTACGAACAATTACCTTCTGATCCACAACAGCTAGCATAG 2805 0.4196 MESLLKDFVIEHKKPSIEASKRWRSAVALVKNHRRRFRMVPDLQKRSEAEQTRKLIQDKVRLALFVQKAALHFISAGGPAQNQEGITIARGMYDGLGIILSVLLVVTVTSVSDYQQSLQFRALDNEKKKIFVHVVRNKRRQKISIYDVVVGDIVYLATGDQVPADGIYISGYSLLVDESSLTGESEPVNVHEDKPFLLSGTKVQDGQGKMLVTGVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIGLTFAVLTFLVLTTRFLVEKAIHGDITQWSSNDAIKLLNFFAISVTIIVVAVPEGLPLAVTLSLAFAMKELMNERALVRHLSACETMGSASSICTDKTGTLTTNHMAVDKIWVCEKSMEIKGNESGTELKEEISEGVLDVLLQAIFQNTSSEVVKDRDGKNTILGTPTESALLEFGLLLGGDFDAQRRYYRILEIEPFNSVRKKMSVLVDLPEGGGTRAFCKGASEIILQTCDKFIDCNGETINLVEGPAKNISDVINNFASEALRTLCLAVKDINENQEKTSIPDNGYTLIAIVGIKDPVRPEVKNAVQTCLAAGISVRMVTGDNIHTAKAIAKECGILTEDGIAIEGGEFRNLSPEQIKHLIPRIQVMARSLPLDKHTLVSHLRNTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKQNADVIIMDDNFNTIVRVARWGRAVYLNIQKFVQFQLTANVVALVINFVSACITGSTPLTALQLLWVNMIMDTLGALALATEPPHDGLMRRPPVAKGATFITKTMWRNIMGQSIYQLIVLGVLNFDGKRLLRITGASNATFVLNTLIFNSFVFCQVFNEINSRDIEKINVFRGITKSWLFIGIIFLTVGFQVIIVEFLGKFASTVPLSWKLWLLSIVIGAISMPISAIVKCIPIERDAIIFQHHDGYEQLPSDPQQLA 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4836g00014 934 NCBIfam HAD-IC family P-type ATPase 98 268 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4836g00014 934 NCBIfam HAD-IC family P-type ATPase 618 735 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4836g00014 934 NCBIfam HAD-IC family P-type ATPase 287 368 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4836g00014 934 NCBIfam HAD-IC family P-type ATPase 443 593 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4836g00014 934 PRINTS H+-transporting ATPase (proton pump) signature 648 664 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4836g00014 934 PRINTS H+-transporting ATPase (proton pump) signature 680 705 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4836g00014 934 PRINTS H+-transporting ATPase (proton pump) signature 505 523 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4836g00014 934 Pfam Cation transporting ATPase, C-terminus 733 907 IPR006068 -
Pral4836g00014 934 NCBIfam calcium-translocating P-type ATPase, PMCA-type 56 911 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pral4836g00014 934 FunFam Calcium-transporting ATPase 107 229 - -
Pral4836g00014 934 PANTHER CATION TRANSPORTING ATPASE 56 909 - -
Pral4836g00014 934 FunFam Calcium-transporting ATPase 545 693 - -
Pral4836g00014 934 FunFam Calcium-transporting ATPase 356 552 - -
Pral4836g00014 934 ProSitePatterns E1-E2 ATPases phosphorylation site. 348 354 IPR018303 -
Pral4836g00014 934 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 352 557 IPR023299 GO:0000166
Pral4836g00014 934 SUPERFAMILY Calcium ATPase, transmembrane domain M 90 910 IPR023298 -
Pral4836g00014 934 FunFam Calcium-transporting ATPase 15 75 - -
Pral4836g00014 934 Pfam Cation transport ATPase (P-type) 402 486 - -
Pral4836g00014 934 Gene3D - 15 75 - -
Pral4836g00014 934 FunFam Calcium-transporting ATPase 665 912 - -
Pral4836g00014 934 PRINTS P-type cation-transporting ATPase superfamily signature 545 556 - -
Pral4836g00014 934 PRINTS P-type cation-transporting ATPase superfamily signature 567 577 - -
Pral4836g00014 934 PRINTS P-type cation-transporting ATPase superfamily signature 648 667 - -
Pral4836g00014 934 PRINTS P-type cation-transporting ATPase superfamily signature 177 191 - -
Pral4836g00014 934 PRINTS P-type cation-transporting ATPase superfamily signature 672 684 - -
Pral4836g00014 934 PRINTS P-type cation-transporting ATPase superfamily signature 346 360 - -
Pral4836g00014 934 Gene3D - 106 204 - -
Pral4836g00014 934 SFLD p-type atpase 328 700 IPR044492 -
Pral4836g00014 934 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 48 IPR024750 GO:0005516
Pral4836g00014 934 SUPERFAMILY Calcium ATPase, transduction domain A 131 227 IPR008250 -
Pral4836g00014 934 Gene3D - 205 358 - -
Pral4836g00014 934 Gene3D - 665 911 - -
Pral4836g00014 934 SFLD Haloacid Dehalogenase 328 700 - -
Pral4836g00014 934 SUPERFAMILY HAD-like 345 753 IPR036412 -
Pral4836g00014 934 Gene3D - 550 664 IPR023214 -
Pral4836g00014 934 Pfam E1-E2 ATPase 131 325 - -
Pral4836g00014 934 Gene3D - 359 549 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4836g00014 Pral-Chr4836 131950 139354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4836g00014 90 932 Primary Pumps ATPases AT2G41560 72.361 0.0 1250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4836g00014 K01537 - gmx:100798481 1297.34