Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4836g00005 ATGGCTTCCTCTTCTTCTGACCCGAGCAAGTCTGAAGTTGGCTGCGGCGGCGGCGGCGGCGGCGGCGGCAGTGCAGAGGTTTCGGATGCAGCGATGGCAAATGATAAACTCTTACTCTATAGGGGATTGAAGAAAGCGAAGAAAGAAAGAGGGTGTACAGCTAAAGAGCGCATCAGCAAGATGCCTCCTTGTGCTGCGGGGAAACGCAGCTCCATATATCGTGGTGTCACCAGGCATAGATGGACTGGTCGTTATGAGGCCCATCTTTGGGATAAAAGTACGTGGAACCAGAATCAGAATAAAAAGGGAAAACAAGTCTACTTGGGTGCATATGATGACGAGGAGGCTGCAGCTAGAGCGTATGACCTTGCTGCTCTAAAATATTGGGGTCCAGGGACTCTAATCAACTTTCCAGTGACTGATTATACGAGAGATCTTGAAGAAATGCAAAATGTTTCAAGAGAGGAATACCTTGCGTCTTTACGGCGGAAGAGCAGTGGTTTTTCTAGAGGAATCTCTAAATATCGGGGACTCTCTAGCCGATGGGAGCCATCATATGGTAGAATGGCTGGATCTGATTACTTCAACAGTATACATTATGGGACCGGTGATGATTCAGCGGCAGAAAGCGAATATGGTAGTGGTTTCTGCATAGAACGAAAGATTGATTTAACAAATTACATCAAGTGGTGGGGATCCAATAAAAGTCGCCAACCTGATGCTGGAACAAAATCATCAGAAGAAAAAAAGCAAGGATTTGCGGGAGATATTTGTGGTGAGTTCAAAACGATGGAACAGGAACTCCAACCCACTGAGCCATACCAGATGCCACAGTTAGGCTTGCCCCATGATAGGAAAAAGCATGAAAGTTCTGCAGTCTCTGCCTTGAGTATTTTATCAAGGTCAGCAGCCTACAAGAGCCTGCAGGAGAAGGCGTCAAGGACACAAGAAAATTACACTGATAACGATGAGGATGAGAACAAAAATACTATCAATAAGTTAGACCAGGGCAAGGCACTTGACAGATCACCACATCATAATGGTGTGGATGAAAGACTTGACATTGCAATGGGAATGAGTGGGGCATTGTCTATTCAAAGAAATGTTTACCCATTGACTTCATTCTTGTCTGCACCACTTTTGACCGCTTATAATACTGCCGACCCCATGGTAGATCCTGTTCTCTGGACATCTCTTGTTCCTATGCTTCCTGCTGGCCTTTCTCGGACAGCCGAGGTTACCAAGACCGAGAGCAGTTCAACTTACACCATATTTCAGCCAGAGGAGTGA 1290 0.4605 MASSSSDPSKSEVGCGGGGGGGGSAEVSDAAMANDKLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYFNSIHYGTGDDSAAESEYGSGFCIERKIDLTNYIKWWGSNKSRQPDAGTKSSEEKKQGFAGDICGEFKTMEQELQPTEPYQMPQLGLPHDRKKHESSAVSALSILSRSAAYKSLQEKASRTQENYTDNDEDENKNTINKLDQGKALDRSPHHNGVDERLDIAMGMSGALSIQRNVYPLTSFLSAPLLTAYNTADPMVDPVLWTSLVPMLPAGLSRTAEVTKTESSSTYTIFQPEE 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4836g00005 429 ProSiteProfiles AP2/ERF domain profile. 72 138 IPR001471 GO:0003700|GO:0006355
Pral4836g00005 429 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Pral4836g00005 429 PRINTS Ethylene responsive element binding protein signature 120 140 IPR001471 GO:0003700|GO:0006355
Pral4836g00005 429 MobiDBLite consensus disorder prediction 309 329 - -
Pral4836g00005 429 FunFam AP2-like ethylene-responsive transcription factor 71 140 - -
Pral4836g00005 429 Gene3D AP2/ERF domain 72 140 IPR036955 GO:0003700|GO:0006355
Pral4836g00005 429 MobiDBLite consensus disorder prediction 1 27 - -
Pral4836g00005 429 SMART rav1_2 72 144 IPR001471 GO:0003700|GO:0006355
Pral4836g00005 429 SUPERFAMILY DNA-binding domain 71 139 IPR016177 GO:0003677
Pral4836g00005 429 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 34 309 - -
Pral4836g00005 429 Pfam AP2 domain 72 130 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4836g00005 Pral-Chr4836 32993 37210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4836g00005 33 413 AP2-EREBP Transcription Factor Family AT2G41710 65.722 1.11e-167 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4836g00005 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4836g00005 K09285 - qsa:O6P43_010133 710.679