Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4834g00060 ATGGAAACAAGCAGAGCTGAGGGAAAGAGGAGCTCGAGGTACAGGAAAAAAGAAGAGGAGGAGGAGGAGGAAGACGAAGAGGAAGAAGTAGAAGAAGACGATGAAGAAGAGACAGAAAGTGAACTTGGCTCTGGAGAAGAACATGGAAGAAAGAGAAGAGTTATGTCAAATACATACAGCAGGAGAGGCCCCAAACCAGGAAGCTCATCGGCGGCGCCACCGTCTTGTCAGGCCGATGACTGCCAGACTGATCTGAGCGACGCCAAACCGTATCACCGGCGGCACAAGGTCTGTGGGTACCACGCCAAAGCGCCGTTCGTACTCGTTTCAGGCAACGAACAACGATTTTGCCAGCAATGTAGCAGGTTTCATGAGCTTTCAGAGTTTGACAACTCAAAAAGGAGTTGTAGAAAGCGTTTGGCAGGGCATAATGAGAGAAGACGAAAGGTTTCATCTGATTATCATGGAGAAGGTTAA 477 0.4885 METSRAEGKRSSRYRKKEEEEEEEDEEEEVEEDDEEETESELGSGEEHGRKRRVMSNTYSRRGPKPGSSSAAPPSCQADDCQTDLSDAKPYHRRHKVCGYHAKAPFVLVSGNEQRFCQQCSRFHELSEFDNSKRSCRKRLAGHNERRRKVSSDYHGEG 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4834g00060 158 MobiDBLite consensus disorder prediction 61 82 - -
Pral4834g00060 158 Gene3D - 67 137 IPR036893 GO:0003677|GO:0005634
Pral4834g00060 158 ProSiteProfiles Zinc finger SBP-type profile. 73 150 IPR004333 GO:0003677
Pral4834g00060 158 MobiDBLite consensus disorder prediction 1 19 - -
Pral4834g00060 158 MobiDBLite consensus disorder prediction 20 42 - -
Pral4834g00060 158 MobiDBLite consensus disorder prediction 138 158 - -
Pral4834g00060 158 FunFam Squamosa promoter-binding-like protein 14 67 137 - -
Pral4834g00060 158 SUPERFAMILY SBT domain 74 154 IPR036893 GO:0003677|GO:0005634
Pral4834g00060 158 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 34 149 IPR044817 GO:0003677
Pral4834g00060 158 MobiDBLite consensus disorder prediction 1 87 - -
Pral4834g00060 158 Pfam SBP domain 76 149 IPR004333 GO:0003677
Pral4834g00060 158 Coils Coil 9 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4834g00060 Pral-Chr4834 602239 605640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4834g00060 67 153 SBP-box Gene Family AT2G33810 64.368 3.67e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pral4834g00060 SBP 8.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4834g00060 - - qsa:O6P43_031859 173.711