Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4834g00053 ATGACAGATTTTGGAAAAGATGAAACAATCCACCTGCAGAGAGATTGCTTCGTTGAGAAGGTTAGTGGTGGTCAAAATCGTATAAAGCATATTAGGAAGTTGAACATGCAATCAGGAGATTCTATGAGCCCAATGACATCAAGAAGTAAGATCACTTTATTTCTGACTGTTAGCTTTTCCGGGCATCCTTCTCCTGACTTGAGGACCAGAGATGTATCTCTCTATGCTGAGATGAAAGTTGGAAACAAGCATCATGAAATCATATGTGCTATTTATGCCAAAGGATGGTGCATCAGGGGTAATTCTTGTAGTTTTCTTCATATAAAAGACCCTGAAAATAAATCCGGCCAGCAGATTGAAGGAGAATTGGTTACTCAGAATTGGAAGAGAGAAGTCCAACCAGAGGAAGGTACTGGAGATGATGTTAAGAGATCAAGGATGCCTTATACTCAAGTTCCGTTGGCTGCCACACAAGAAAGAACATTTCAGTATTCATCTGAATTTTCCTCAAACCCCATCATCCAGAAAGAAGTAAGCCCAAGCTGGCATCCAAATAAAAGCTGGTCTGTCTCCTCCTTCCCTTCCAGTCTAACCCATACAGAGGGAATGACTACCACTCAACGCCTAGACATGCATCATGGATATACATCCCAATTTGAGAGTCATTCACCTAATGTAAACATGGCTACTCACCTTCCAACTGCATGTATATCGCTGTCCCATCACATTCCTTCCCGATCAGGATGTTCATTGTCTTTTAGTGGATCCATAAGTGAAAGTTCTATGGATTCTCAACAACTTCTGAACAGTGGCATGGCTTGTCATGACAGAAGATCCCCTTTCTCTGGTTCAAAAAGGGAAGGTTTGGCTCTAAATGGTTCATTTGGGGTCCCACCACACCCAACTGGATGTACATTAAATTTCTCTTCATATGATTGGGAGCCGTCCATACCTTTCAAACCATCTTTTTTTATTACTTCTTCAGGTAGATCATCTGTTGAAGATCAAAAAGACCCTTTTGACATTATTGTTGAGATACCCAATACAGGGGATGAATCCTTGAAGGCTTTCATTTTATTTCAAAGAACATCCATTCGGACTTCATCTCAGGTTCCTACAAATGGTGAGTCTGTTGAAGCTGCAAATCGGGGTTCAGATCTTCGTGGTGCCAAAAGTTCTGTATCTTCTCATCATAGATGTAATAAAACAGAACCAGAGAAGAATTGTGTTCCTCATGAAAAAAGTTTTGTTACAGCTGAAGCAGATACAATGGCAGCAACATATCTAAATTGCCAATTTTGA 1302 0.4048 MTDFGKDETIHLQRDCFVEKVSGGQNRIKHIRKLNMQSGDSMSPMTSRSKITLFLTVSFSGHPSPDLRTRDVSLYAEMKVGNKHHEIICAIYAKGWCIRGNSCSFLHIKDPENKSGQQIEGELVTQNWKREVQPEEGTGDDVKRSRMPYTQVPLAATQERTFQYSSEFSSNPIIQKEVSPSWHPNKSWSVSSFPSSLTHTEGMTTTQRLDMHHGYTSQFESHSPNVNMATHLPTACISLSHHIPSRSGCSLSFSGSISESSMDSQQLLNSGMACHDRRSPFSGSKREGLALNGSFGVPPHPTGCTLNFSSYDWEPSIPFKPSFFITSSGRSSVEDQKDPFDIIVEIPNTGDESLKAFILFQRTSIRTSSQVPTNGESVEAANRGSDLRGAKSSVSSHHRCNKTEPEKNCVPHEKSFVTAEADTMAATYLNCQF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4834g00053 433 ProSiteProfiles Zinc finger C3H1-type profile. 88 110 IPR000571 GO:0046872
Pral4834g00053 433 SUPERFAMILY CCCH zinc finger 83 107 IPR036855 GO:0046872
Pral4834g00053 433 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 65 419 - -
Pral4834g00053 433 MobiDBLite consensus disorder prediction 370 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4834g00053 Pral-Chr4834 508665 510125 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral4834g00053 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4834g00053 - - pcin:129285431 365.925