Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4834g00004 ATGTCCACCGTTCTTCTTCTTCCTCTGTTACTCCTGCTTCTTCCCTCCATTCTCTCTCTCAACCAGGAGGGTCTCTATCTCTACCAGTTCAAGCTCTCTCTCGACGACCCGGATGCCTCTCTCTCCTCCTGGAACCCCCGTGATGTCACCCCATGTGCCTGGTCCGGTGTCACCTGCGGTGCTGCCTCCAATTCCTCCGTCACTCGCCTTGACCTCTCCAACACTAATATCGCCGGCCCATTCTCTGCCTCCATCCTCTGCCGCCTCCCCAACCTCTCCTTCGTCTCTTTCTTCAACAACTCTGTTAATCAAACCCTTCCTGCAGATATCTCCTCTTGTCGCTCCCTCGTTCATCTGGACCTTTCCCAGAATCTCCTCACCGGTGAACTTCCGCATACTCTGTCTCTACTGCCCAATCTCAGATACCTGGACTTGACCGGAAACAATTTCTCGGGTCCTATTCCTGACTCATTTGGGAGCTTTCGGAAGCTCGAGGTTATTTCTCTTGTGTCTAATCTTCTAGAAGGTACCATTCCCGCTTCTCTGGGTAATATTACGACATTGAAGATGCTCAACCTTTCGTATAACCCGTTTTATCCGGGTCGGATCCCGCCGGAGATCGGGAACCTGACTAATCTCGAGGTGCTTTGGTTAACGCAATGTAACCTGGTTGGCACGATTCCCGACTCGCTAGGGAAGTTGAAGAAGCTCAGGGATTTGGACCTGGCATTCAATAATCTGTACGGGTCGATCCCGAGTTCGCTTATGGAGATGACGAGTTTGAACCAGATTGAACTGTACAATAACTCATTGTCCGGTGAGTTGCCTCGGGGATGGTCCAACCTCACTTCATTGAGGCTCCTCGACGCGTCGATGAACCACCTCACGGGGACCATTCCGGATGATTTGTGTCGTTTGCCACTGGAAAGCCTCAATCTCTACGAAAATCGTTTCGAGGGCGAGTTGCCGGAGAGCATAGCTGACTCTCCGAATCTCTATGAGCTTAGATTGTTTGGGAACAGGCTCACCGGGAAGCTGCCGGCGAATCTTGGCAAAATTTCGCCATTACGGTGGATCGACCTGTCAACCAACCAGTTCTGGGGAGGAATTCCGGCTAGTTTGTGTGACCAGGGGCAGTTGGAGGAGCTTCTGCTGATATACAATTTGTTTTCTGGTGAGATCCCGGCGAGTTTGGGGATGTGTCAGAGCTTGACAAGAGTTAGGCTCGGTTACAACCGGTTGTCCGGCGAAGTTCCGGCCGGTATATGGGGGCTTCCGCATGTATACCTTCTGGAGCTTGTTGATAACTCTTTTTCGGGTCCAATTTCTTCAACTATTGCTGGAGCTGGGAATCTGTCGTTATTGATTCTATCGAAGAACAATTTCAGTGGAGCGATCCCTGATGAGATTGGATGGTTGGAAAATATTGAGGAATTTTCTGGGAGTGATAACAACTTTACTGGGTCGCTGCCTGATAGTATTGTGAATCTTGGGCAACTTGGAACTCTTGATCTTCACAACAATAAACTCTCTGGCCAGCTCCCCAAGGGAGTTCGATCCTTGAAGAAACTTAATGAGTTGAATTTGGCCAACAATGACATTAGTGGCAAAATTCCTGATGAAATTGGGAGTTTGTCCGTGCTCAATTTTCTTGACCTTTCCCACAATCAACTTTCCGGGAAAGTTCCTCGTGGGTTACAGAATTTGAAGCTTAACCAGCTGAATTTGTCTTATAATCGACTTTCTGGAGAACTTCCCCCTCAGTTGGCTAAGGATATGTACAGGACTAGCTTTTTGGGTAATCCTGGTTTATGTGGGGATCTGAAAGGTCTATGTGATGGCAGAAGTGATGCTAAAAATGAAGGTTACATTTGGTTACTTCGAGCTATGTTCATCATTGCCACTTTGGTGCTTCTCATTGGTGTGGTCTGGTTCTATTTCAAGTATAGGAACTTCAAGAACGCAAGAAGAGCCATTGATAAATCGAAATGGACATTGATGTCCTTCCATAAACTGGGTTTTGGTGAAGATGAGATGAACTGCCTTGATGATGACAATGTGATAGGAAGTGGGTCATCAGGGAAAGTTTACAAGGTAGTGCTTAGCAATGGGGAGGCAGTTGCTGTGAAGAAACTATGGGGAGGTGCTGTGAAGGACATAGAGAGTGGTGATTTTGAGAAAGGCCAGGTTCAAGACAATGCTTTTGATGCAGAGGTTGAGACTCTTGGCAAAATTAGGCATAAGAACATTGTAAAGTTGTGGTGTTGCTGTACTACTAGGGACTGCAAGCTCTTGGTGTATGAGTACATGCCTAATGGTAGTCTTGGAGATTTGCTACATAGTAGTAAAGGTGGATTGTTGGATTGGCCAACAAGGTATAAGATAGCAGTTGATGCTGCTGAAGGCCTCTCTTATTTGCATCATGACTGTGTTCCACCAATTGTTCATAGAGATGTAAAATCCAACAATATCTTGCTGGATGGTGACTTTGGCGCAAGGGTGGCTGATTTTGGAGTTGCTAAGGTTGTTGAAACCACTGCTAAGGGAGCTAAATCCATGTCTGCCATAGCTGGGTCATGCGGATACATTGCACCAGAATATGCATACACGCTCAGAGTGAATGAGAAGAGCGACATCTATAGTTTTGGTGTCGTCATACTCGAGTTAGTAACTAGAAGACGCCCGGTAGACCCAGAATTTGGGGAAAAGGACTTGGTTAAGTGGGTCTGCACCACTATAGATCAGAAAGGCGTGGATCATGTACTTGACTCCAGTCTTGATTCTTGTTTCAAAGAAGAGATCTGCAAGGTCCTCAACATTGGCCTCATGTGCACTAGTCCTCTTCCAATTAACCGCCCGGCCATGAGAAGAGTGGTGAAGATGTTGCAAGAAGTAGGCACAGACAGTAACCAAACGAAGGCATCGAAGAAAGATGGGAAGTTGTCACCATATTACTATGACGATGGCTCTGATCATGGGAGTGTACCTTAG 2991 0.4697 MSTVLLLPLLLLLLPSILSLNQEGLYLYQFKLSLDDPDASLSSWNPRDVTPCAWSGVTCGAASNSSVTRLDLSNTNIAGPFSASILCRLPNLSFVSFFNNSVNQTLPADISSCRSLVHLDLSQNLLTGELPHTLSLLPNLRYLDLTGNNFSGPIPDSFGSFRKLEVISLVSNLLEGTIPASLGNITTLKMLNLSYNPFYPGRIPPEIGNLTNLEVLWLTQCNLVGTIPDSLGKLKKLRDLDLAFNNLYGSIPSSLMEMTSLNQIELYNNSLSGELPRGWSNLTSLRLLDASMNHLTGTIPDDLCRLPLESLNLYENRFEGELPESIADSPNLYELRLFGNRLTGKLPANLGKISPLRWIDLSTNQFWGGIPASLCDQGQLEELLLIYNLFSGEIPASLGMCQSLTRVRLGYNRLSGEVPAGIWGLPHVYLLELVDNSFSGPISSTIAGAGNLSLLILSKNNFSGAIPDEIGWLENIEEFSGSDNNFTGSLPDSIVNLGQLGTLDLHNNKLSGQLPKGVRSLKKLNELNLANNDISGKIPDEIGSLSVLNFLDLSHNQLSGKVPRGLQNLKLNQLNLSYNRLSGELPPQLAKDMYRTSFLGNPGLCGDLKGLCDGRSDAKNEGYIWLLRAMFIIATLVLLIGVVWFYFKYRNFKNARRAIDKSKWTLMSFHKLGFGEDEMNCLDDDNVIGSGSSGKVYKVVLSNGEAVAVKKLWGGAVKDIESGDFEKGQVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETTAKGAKSMSAIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTRRRPVDPEFGEKDLVKWVCTTIDQKGVDHVLDSSLDSCFKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGTDSNQTKASKKDGKLSPYYYDDGSDHGSVP 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4834g00004 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 20 185 - -
Pral4834g00004 996 SMART LRR_typ_2 521 545 IPR003591 -
Pral4834g00004 996 SMART LRR_typ_2 282 306 IPR003591 -
Pral4834g00004 996 SMART LRR_typ_2 137 160 IPR003591 -
Pral4834g00004 996 SMART LRR_typ_2 234 258 IPR003591 -
Pral4834g00004 996 SMART LRR_typ_2 89 113 IPR003591 -
Pral4834g00004 996 SMART LRR_typ_2 497 520 IPR003591 -
Pral4834g00004 996 FunFam Receptor-like protein kinase HSL1 307 614 - -
Pral4834g00004 996 SUPERFAMILY RNI-like 203 576 - -
Pral4834g00004 996 FunFam Receptor-like protein kinase HSL1 667 769 - -
Pral4834g00004 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 979 - -
Pral4834g00004 996 Pfam Leucine rich repeat 111 150 IPR001611 GO:0005515
Pral4834g00004 996 Pfam Protein kinase domain 685 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4834g00004 996 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 188 964 - -
Pral4834g00004 996 Gene3D Ribonuclease Inhibitor 18 200 IPR032675 -
Pral4834g00004 996 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Pral4834g00004 996 Gene3D Phosphorylase Kinase; domain 1 653 769 - -
Pral4834g00004 996 MobiDBLite consensus disorder prediction 971 985 - -
Pral4834g00004 996 SMART serkin_6 682 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4834g00004 996 SUPERFAMILY Protein kinase-like (PK-like) 674 963 IPR011009 -
Pral4834g00004 996 FunFam Leucine-rich receptor-like protein kinase family protein 203 301 - -
Pral4834g00004 996 MobiDBLite consensus disorder prediction 968 996 - -
Pral4834g00004 996 SUPERFAMILY RNI-like 62 276 - -
Pral4834g00004 996 Gene3D Ribonuclease Inhibitor 308 614 IPR032675 -
Pral4834g00004 996 ProSiteProfiles Protein kinase domain profile. 682 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4834g00004 996 Gene3D Transferase(Phosphotransferase) domain 1 770 988 - -
Pral4834g00004 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Pral4834g00004 996 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Pral4834g00004 996 Gene3D Ribonuclease Inhibitor 201 307 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4834g00004 Pral-Chr4834 82069 86050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4834g00004 15 995 Receptor kinase-like Gene Family AT1G28440 71.356 0.0 1439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4834g00004 Pkinase 4.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4834g00004 - - gmx:100819887 1635.54