Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4834g00003 ATGACATGGTGCAACGAGTCATCAGACGAAGAGGAGCAGAATAATAATAGTAATAATAAGGCGATTCAGATGATTAATTCGCCCTCCATTGTTACTCCTTTTTCTGCTGCTTCAGTTAATAATCAACAAGCCGTCGCAGCAAAACCCTCCGAGATTCGAACCGTTACTTGCCCTTCATGCGGCCATAACATTCAACTCCAAGATCAGGCTGGGATTCATGAGCTTCCAGGGCTTCCAGCTGGAGTGAAATTTGATCCAAACGATCAAGAAATATTGGAGCATTTGGAGGCCAAAGTTCTGTCTGATGTGCGTAAGCTTCATCCTCTCATTGATGAGTTCATTCCAACGCTTGAAGGCGAAAATGGCATCTGTTATACTCACCCAGAAAAGCTTCCAGGGGTAAGCAAAGATGGACAGATCCGGCACTTCTTTCACAGGCCTTCAAAGGCATACACAACAGGAACCAGAAAGAGAAGAAAGGTTCACACAGACGAAGAAGGAAGCGAGACAAGGTGGCACAAAACAGGCAAAACAAGACCAGTCCTATGTAATGGTGCCGTCAAAGGTTTCAAGAAGATCCTCGTTCTCTACACCAACTATGGCAGACAGAAGAAACCAGAAAAGACCAACTGGGTTATGCATCAGTACCACCTGGGAACCAACGAGGAAGAGAAGGATGGAGAGTTAGTTGTTTCCAAGGTTTTCTTCCAGACACAACCCAGACAATGTGGTTCCATTATGAAGGACCCTTTTGACACAAAAGGGACACTACTAAACAACGATAATAACATCCATGACAGTACAGCGATCATAGGTAATAAAGAAACAGCCGCAGCTTTTGTGGACTATTACACTAATCCTTCTCCTTACATAAGTTATGATCATCATTTGGGACATCATAGTAACTCAGAAAGCTCTCCTCAACTTATTCCCAACTTGGTTGTTCAAGGTGACCATGCCTCTCCCTTCATTCGTTTAGCTATGGATCATTCCAACAAAGGAAGACTTGACAGAAAAATGTAG 1023 0.435 MTWCNESSDEEEQNNNSNNKAIQMINSPSIVTPFSAASVNNQQAVAAKPSEIRTVTCPSCGHNIQLQDQAGIHELPGLPAGVKFDPNDQEILEHLEAKVLSDVRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVLCNGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTNEEEKDGELVVSKVFFQTQPRQCGSIMKDPFDTKGTLLNNDNNIHDSTAIIGNKETAAAFVDYYTNPSPYISYDHHLGHHSNSESSPQLIPNLVVQGDHASPFIRLAMDHSNKGRLDRKM 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4834g00003 340 MobiDBLite consensus disorder prediction 151 173 - -
Pral4834g00003 340 FunFam NAC domain-containing protein 73 87 241 - -
Pral4834g00003 340 SUPERFAMILY NAC domain 72 237 IPR036093 GO:0003677|GO:0006355
Pral4834g00003 340 Pfam No apical meristem (NAM) protein 79 218 IPR003441 GO:0003677|GO:0006355
Pral4834g00003 340 Gene3D NAC domain 87 241 IPR036093 GO:0003677|GO:0006355
Pral4834g00003 340 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 40 273 IPR044799 GO:0003700
Pral4834g00003 340 MobiDBLite consensus disorder prediction 157 173 - -
Pral4834g00003 340 ProSiteProfiles NAC domain profile. 78 237 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4834g00003 Pral-Chr4834 51322 56104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4834g00003 1 245 NAC Transcription Factor Family AT4G28500 70.325 4.68e-123 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4834g00003 NAM 8.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4834g00003 - - gmx:100795920 463.766