LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4833g00049	ATGGACCAAAGAAACTCTGTGCTTCTTCTGCTATTGCTTCTGTTCCAAGTTCTGTTTGTAGCAACACAGAACTCCAATCGAGACTTTACTGCTTTATCATCTCTCACTGAATTTTAAAACAAGCCACCAAGTTGGGTGGGCACAGATCCTTGTGGGTGGGAAGGCATCGAATGTAACAATTCGAGAGTGGCATCAATAAAACTGTTAAGCATGAACTTAAAAGGCAGGTTGACGGAGGCTATTGGGAGATTAACTGAATTAACGACTCTGGACCTCTCTTACAACAAAGGCATGGGTGGAAGAATTCCAGCTGAAATTGGGAATTTGAGTAAATTACAAATCCTGTCATTGGTTGGTTGTGATTTCTCTGGTCCTATTCCTGAATCATTAGGAGATCTTAAGCGGCTGACCTTTTTAGCTCTTAATCTTAATCGGTTGAGTGGAAATATTCCACGTACGTTGGGCAATCTATCCAATGTCAATTGGCTAGATATTGCAGACAACCAGATTGAAGGACCTATCCCTATCTCTGATGAAGAAGGACCTGGTCTTGACATGCTACTCAAAGCAGAGCACTTTCATTTTGGAAACAACCGCCTCTCAGGGGAAGTTCAAGCTAAGCTTTTAAGTTCAAAGATGATACTGAAACACCTGCTTCTTGACAACAATCACCTAGTTGGCAGCATTCCAGACACTACTGGATTGATAAAGACATTGACGGTGGTACGGTATGATCACAATCAAATGACTGGAGAAGTGCCTTCAAGTATCAAAAATCTCACAAAACTCACTGATCTGAATTTAGGCAACAATAAACTAAATGGCTCTATGCCCGATCTTACTGGATTAGATGCACTCGCCTCTGTGGATTTGAGCAACAACTCTTTTAATCCTTCCAATATCCCTTCATGGGCCTCAAGCTTGCCATATTTAACTACACTATTATTGGAAAGCACTGGACTGCAAGGGGAAATACCGGACTCCTTATTTAGCCAATCTAATTTAGAGACTGTGATATTGAGGAATAATAAGCTCAATGGTACCTTGGATGTCGGCAACAGCCTACCCAATTTGAATCTTATTGATTTACAGGATAATAGGATAGGTGACTTTGAACAGAAAAGTGGAGGAACCAGTTTTAATGTCGTACTAGTTGGAAACCCCATTTGTCTTGAAACAGGAGCTACTTCGCAAAGTTACTGCAAAAGCTCGCAAACTAATATCACATATTCAACACCAGAAAATAACTGTATACCTCCTGTTTGTGGTTCAAACATGGTTTCCAGCCCAAACTGCAAATGTGCATTTCCCTATAGAGGAGTTCTGACTTCTAGAGCTCCTGGTTTCTCAAACTTTAGAAACACAAGTTATTTTAAGGATCTTGAGCATGGCCTGTTGACTACTTTCCAGTCCCATGACCTGCCCGTGGATTCTGTTTCTCTGACCAATGCATTCCAGAATTCTGTTACTTCTTATTTTAGTTTGGACGTAGAAGTCTTCCCATCTCAAATTGACCGTTTCAACAGAACTGGAGTTTTAAGCATTTCGTTCGTGCTTTCCAACCAGATCTATAAACCTCCAGAATTTTTCAGCCCTTACTATTTTTCTAGTAATAATACCTATGAATTCTATGCAGAAGAGCCTTCATCAAGTAAAACAAATGGGGGGGTTATAGCTGGTGCAGTAGCAGCTGGTGTCGTCGTCTTGGTCCTGTCCATCCTTGTAGTAATATTTGCAATCCGCCAGAAGAAAAGGGCAAAGGAATTTGATCCTTTTGCAAACTGGGATCAAAACAATAAAAGTGGCAATGCTCCTCAGCTAAAAGGAGCACGGTGGTTTTCTTTTGAAGAGCTCAAGAAACACACCAACAACTTCTCCGACGCCAATACTATTGGAGCTGGGGGCTATGGAAAGGTTTACCAAGCTGTTCTTCCCTCTGGGGAACTGGTTGCTGTCAAGCGTGCTTCGCAAGAATCTATGCAGGGTGCTGTTGAGTTCAAAACTGAGATTGAGCTGCTATCAAGGGTCCATCACAAGAATCTTGTTGGTCTTGTGGGTTTCTGTTATGACAAAGGTGAACAAATGCTGGTCTATGAGTATATTCCTAATGGCACTATGATGGACAGTCTTTCAGGAAAATCTGGAATCAGAATGAACTGGATAAGGAGGCTAAAAGTAGCTGTGGGAGCAGCCAGGGGGCTTTCCTATCTTCATGAACTCGCTGATCCGCCAATTATACACAGGGACATAAAATCAAGTAATATCCTTCTTGATGACCACTTAAATGCAAAAGTTGCTGATTTCGGTCTCTCCAAACTCAAGGATTGCGACAGGGCCCACATCACAACTCAAGTCAAAGGCACAATGGGGTATATGGATCCTGAATACTACATGACTCAGCAGTTAACAGAAAAGAGCGATGTATATAGCTTTGGAATTACAATGCTTGAGCTGGTAACAGCAAGGAAGCCAATTGAGCAAGGAAAATTCATTGTAAGAGAGGTTCAAAGGGTAATGGATAGATCAAAGGAGTTGTACAACCTTTATGCCATTATAGACCCAATAATAAAGCAAGAGGGAACCCCAAAAGGTTTAGAGAAGTTTGTGGACCTAGCACTGAGGTGTGTCAAAGATCAAGGGGAAGAGAGGCCAGCAATGGCTGAAGTTGTGAAAGAGATTGAGAATATAATGCAGCTTGCTGGTTTCAACCCCAATGCTGAATCAGCATCAACATCAGAAACCCATGAAAATGTTAGTGGTGGGAAGATCTACCATCCTTACGTTGATGAAGATTTCGCCTACACGAGCGTTTTTCCACCAGTAAAAGTGGAACCTCAATAG	2841	0.4175	MDQRNSVLLLLLLLFQVLFVATQNSNRDFTALSSLTEFWXNKPPSWVGTDPCGXWEGIECNNSRVASIKLLSMNLKGRLTEAIGRLTELTTLDLSYNKGMGGRIPAEIGNLSKLQILSLVGCDFSGPIPESLGDLKRLTFLALNLNRLSGNIPRTLGNLSNVNWLDIADNQIEGPIPISDEEGPGLDMLLKAEHFHFGNNRLSGEVQAKLLSSKMILKHLLLDNNHLVGSIPDTTGLIKTLTVVRYDHNQMTGEVPSSIKNLTKLTDLNLGNNKLNGSMPDLTGLDALASVDLSNNSFNPSNIPSWASSLPYLTTLLLESTGLQGEIPDSLFSQSNLETVILRNNKLNGTLDVGNSLPNLNLIDLQDNRIGDFEQKSGGTSFNVVLVGNPICLETGATSQSYCKSSQTNITYSTPENNCIPPVCGSNMVSSPNCKCAFPYRGVLTSRAPGFSNFRNTSYFKDLEHGLLTTFQSHDLPVDSVSLTNAFQNSVTSYFSLDVEVFPSQIDRFNRTGVLSISFVLSNQIYKPPEFFSPYYFSSNNTYEFYAEEPSSSKTNGGVIAGAVAAGVVVLVLSILVVIFAIRQKKRAKEFDPFANWDQNNKSGNAPQLKGARWFSFEELKKHTNNFSDANTIGAGGYGKVYQAVLPSGELVAVKRASQESMQGAVEFKTEIELLSRVHHKNLVGLVGFCYDKGEQMLVYEYIPNGTMMDSLSGKSGIRMNWIRRLKVAVGAARGLSYLHELADPPIIHRDIKSSNILLDDHLNAKVADFGLSKLKDCDRAHITTQVKGTMGYMDPEYYMTQQLTEKSDVYSFGITMLELVTARKPIEQGKFIVREVQRVMDRSKELYNLYAIIDPIIKQEGTPKGLEKFVDLALRCVKDQGEERPAMAEVVKEIENIMQLAGFNPNAESASTSETHENVSGGKIYHPYVDEDFAYTSVFPPVKVEPQ	948

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4833g00049	948	SMART	serkin_6	627	904	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4833g00049	948	Gene3D	Transferase(Phosphotransferase) domain 1	703	918	-	-
	Pral4833g00049	948	SUPERFAMILY	Protein kinase-like (PK-like)	613	906	IPR011009	-
	Pral4833g00049	948	FunFam	Leucine-rich repeat family protein	27	181	-	-
	Pral4833g00049	948	ProSitePatterns	Protein kinases ATP-binding region signature.	633	655	IPR017441	GO:0005524
	Pral4833g00049	948	ProSiteProfiles	Protein kinase domain profile.	627	899	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4833g00049	948	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	703	912	-	-
	Pral4833g00049	948	CDD	STKc_IRAK	633	898	-	-
	Pral4833g00049	948	FunFam	Leucine-rich repeat protein kinase family protein	594	702	-	-
	Pral4833g00049	948	SUPERFAMILY	L domain-like	59	373	-	-
	Pral4833g00049	948	PANTHER	RECEPTOR-LIKE PROTEIN 55	33	898	-	-
	Pral4833g00049	948	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	747	759	IPR008271	GO:0004672\|GO:0006468
	Pral4833g00049	948	Pfam	Protein kinase domain	628	893	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4833g00049	948	Gene3D	Ribonuclease Inhibitor	282	418	IPR032675	-
	Pral4833g00049	948	ProSiteProfiles	Leucine-rich repeat profile.	264	286	IPR001611	GO:0005515
	Pral4833g00049	948	Gene3D	Ribonuclease Inhibitor	24	180	IPR032675	-
	Pral4833g00049	948	Gene3D	Ribonuclease Inhibitor	181	281	IPR032675	-
	Pral4833g00049	948	FunFam	Leucine-rich repeat protein kinase family protein	182	281	-	-
	Pral4833g00049	948	Gene3D	Phosphorylase Kinase; domain 1	597	702	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4833g00049	Pral-Chr4833	517723	525690	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4833g00049	8	948	Receptor kinase-like Gene Family	AT5G49760	52.947	0.0	956

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Pral4833g00049		Pkinase	5.9e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4833g00049	-		-	gmx:100786172	1166.37