Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4833g00037 ATGGCGTCATCGTCTTCCCAAGCTGAGCTTCTTCCTCTCAACCATGATGATTCTCAAGACATGGTAATTTACCAAGTCCTCACCGAAGCCAACGCTCTTCCACCTTCTCACAGATCGACTGCAGCTGCACTAGTCCCTGGCCTCCGTCAGGCCACCACCAGCGGCCACGTCAAGAAGCACTACCGGGGCGTGAGGCGGCGGCCGTGGGGGAAGTATGCGGCTGAGATCCGGGACTCGGCTCGCCATGGGGCTAGGGTTTGGCTGGGGACGTTTGAGACGGCGGAAGAGGCCGCCTTGGCTTACGACAGAGCTGCTTTCAGAATGAGAGGCTCTAAGGCTCTTCTCAATTTCCCTCGTGACGTCGTAGCTTCTTCTTCTTCTATTTTCAGACCAGAAAGATTGAATGATAAGGTTTCTTCTGAGTCTGATTCAAGTGCTGCTGTTGGCTCATGTGCAAGTTCTGTTAAGAATCCGAGTTTGATTCCAGATAGATGTGACGTGTAG 504 0.5317 MASSSSQAELLPLNHDDSQDMVIYQVLTEANALPPSHRSTAAALVPGLRQATTSGHVKKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGSKALLNFPRDVVASSSSIFRPERLNDKVSSESDSSAAVGSCASSVKNPSLIPDRCDV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4833g00037 167 PANTHER DNA-BINDING DOMAIN 47 139 IPR044808 GO:0003700|GO:0009873
Pral4833g00037 167 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Pral4833g00037 167 Gene3D AP2/ERF domain 59 120 IPR036955 GO:0003700|GO:0006355
Pral4833g00037 167 SUPERFAMILY DNA-binding domain 60 119 IPR016177 GO:0003677
Pral4833g00037 167 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Pral4833g00037 167 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Pral4833g00037 167 MobiDBLite consensus disorder prediction 133 153 - -
Pral4833g00037 167 ProSiteProfiles AP2/ERF domain profile. 60 118 IPR001471 GO:0003700|GO:0006355
Pral4833g00037 167 FunFam Ethylene-responsive transcription factor 2 59 119 - -
Pral4833g00037 167 CDD AP2 59 118 IPR001471 GO:0003700|GO:0006355
Pral4833g00037 167 SMART rav1_2 60 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4833g00037 Pral-Chr4833 370994 371864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4833g00037 11 118 AP2-EREBP Transcription Factor Family AT5G47220 54.331 5.71e-39 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4833g00037 AP2 1.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4833g00037 K13433 - qsa:O6P43_012708 163.31