Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4833g00031 ATGAATTACCCTTTCATTATTCCTGAAGCACTTCCTAGATTTTGCCTATTCTTTCTTCTGCTCAGCTCTTCCTTTTTCTTTAATGTCTATGGAGATGAGTCTACAAAAGGAGACAGTAAAGTTATACGTGTTGGTGCAATTATTGATGTTAACTCTCGTATGGGTAAAGAACAGCAAATAGCCATGGAGATTGGAGCTCAAGCCTACAATAACACATCAAAGACTCACAAGCTGGCTCTTTATTTCCAAAATGCCTCTAAGGAAGCCTTCAGAGTCGCCTCTCTTGCTGAAGAGTTAATTGAGATGCAGAAAGTAGAAGTAATTATAGGGATGCATTCATGGCAAGAAGCAGCTCTGGTGGCTGAAGTTGGAAGCCAAGCTCAAGTTCCAATCATATCCTTTGTATCACCTGCAATAATCCCACCTTTGACGCAAAAACGCTGGCCTTATCTGGTTAGACTAGCTAACAATGTCACTGCACATGTAAAATGCATTGCAGATATAGTGAATGCTTTTAGTTGGCAAAGAGTGGTAGTAGTTTATGAGGAAGATGGCTATGTTGGTGGAGACTATGGGATGCTCTCTCTCCTTTCTGAGGCTCTTCAAGACTTTGGTTCACTAATTGAATACCGTTTGGCGCTTCCACCAATTTCTTTTCTGCCAGACCCAGGAGAGCTAATCAATGAAGAGCTGATTAAGCTGGTAAATCAAACTCAATCTCGCGTTTTCATAGTTTTGCACTCATCCTTAGAAATGGTGACTCATTTGTTCAGAGAAAGTTCAAAGATGGGACTTGTGGATAAAGATTCAGCTTGGATAATCTCTGAGAGCATAACTAATTTGCTTGACTCTGTGGATAAATCTGTTATTTCCTCCTATATGGGAGGGTCTTTAGGAATCAAGATGCATTACTTAGAAAATAGCAGTGAGTATCAAGATTTTCAAGCTCAGTTCAGGAAAAAATTTCGTGCAAAGTATCCTGAGGAAGATAACAGCAACCCAGGATTTTATGCTTTGCAAGCATATGATGGCATCAAAGTTGTCATTCAAGCAGTAGAAAGAATGGCAAGGGACAAAAGTAGCAGCCCAAAAGCTTTGCTAAGAGAGATATTGTCTAGCAGTATCAATGGTTTAAGTGGGAAAATTCATTTTCAAGCAGGTCAGCTCTTGCAGAATCCTATCCTAAGGATAGTTAATGTAGTTGGCAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACCACAAGCCTTCCTACAGGAAAAAGTGAAGAAAATGCTACTGCTAACACACAAAGTTTGGCGGGTGTAGTACAATGGCCAGGGAATTTGGAGAGAACTCCTAAAGGTTGGAATATGCCTGTTAAGCGAAACCCAATGAAAATTGCGGTTCCAGGAAGAACTTCGTTTTCAAAGTTTGTCAAGGTTGACTACGGAGAAAGTCCAGACCAGAATCAATATAAAGGATTCTGTATTGAGGTTTTCGACAAGGTGCTCGAGCTTTTGGAATATGATCTACCCTATGAGTTTCATCCCCTCAATCTAACTTATACTGATCTGGTTCAACTTGTGTATAACAAGACTTATGATGCTGTGGTTGGTGACGTGACCCTACTAGCAGAGAGACTGCAATATGTGGATTTTACTGTACCATATGCAGAATCGGGATTGTCCATGATAGTTCCAGTGAAGTCTCAAGATTCAACATGGATGTTTATAAAGCCATTCACCTGGCAAATGTGGGCGGTTACTGGTGCAATTTTGAATTACACTATGTTAGTAGTTTGGTACCTTGAACGAGTACCTAATCCAGAGTTTCAAGGCAATTGGAAGAGACAGTTCAGCACTGCTCTCTGGTTTACCTTCTCCTCCCTATTCTTTGCCCATAGGGAGCAAATGCATAGTAACTTATCTCGCGTGGTGATGGCAGCATGGCTTCTTCTAGTTATGGTTCTGACCTCAAGCTACACAGCTAGCCTTTCTTCAATGCTAACAGTTCAACAACTGCAGCCAAATGTCACAAGCATCGAGTGGTTGAAGAGGAACAATGTGAAAATTGGTTGCGATGGCGACTCATTTGTTAGGACATACCTAGAGAAAGTCGAAAAGTTCAACCCAGAAAACATCATCAACCTAAGTAGTGAATACAATTATGATGATGCATTCAAAAGCAATTCAATAACAGCAGCTTTTCTCGAACTCCCTTATGAAAAAGTATACATAAGTACTTATTGCAAGGAATATTCTGGCTCCGCACCAACCTCCAGATTTGGAGGCCTAGGCTTTATATTCCAAAAAGGCTCCCCACTGACCAAAGATGTTTCTAAAGCAATATTGCAGCTTTCAGAGAGGGGAGAACTAACCAACTTGGAAGCAAAATGGTTACATCGCTCAAACGAGTGCACCAACAACTCTAGTTCAAATGATACTCAAAGTCTGAAGCTTAAAAGTTTCTGGGTTCTCTTTGTCATTTCTGGGGTCATATCAACAATTTGTTTACTATTTTCTATCATTCAATCACAAGGATTTTGTCAGCTAACTCAAAAAATCGTTGAAGAAGGCAATGGACCCACAAGTGATGTGACAATGTGGATAAGAACACTTGAATTAGCCAAGCGGATTTATGGCAGAAAGCTTATTCAGGAAACTCACTTGTACCCGCCCGATATTGGGACACAAGATGTAACTGACTGTTCTTCCAGATGGGACAATGTCAGTACCACTGATTCACCTATGCATCAACAAGATACTGCATCCCCAGCATCAACAGCCATTTTGCTCACTTCACCACAACCAGAGACACCAATCGAAACCCCTGACAATAGATGA 2838 0.4063 MNYPFIIPEALPRFCLFFLLLSSSFFFNVYGDESTKGDSKVIRVGAIIDVNSRMGKEQQIAMEIGAQAYNNTSKTHKLALYFQNASKEAFRVASLAEELIEMQKVEVIIGMHSWQEAALVAEVGSQAQVPIISFVSPAIIPPLTQKRWPYLVRLANNVTAHVKCIADIVNAFSWQRVVVVYEEDGYVGGDYGMLSLLSEALQDFGSLIEYRLALPPISFLPDPGELINEELIKLVNQTQSRVFIVLHSSLEMVTHLFRESSKMGLVDKDSAWIISESITNLLDSVDKSVISSYMGGSLGIKMHYLENSSEYQDFQAQFRKKFRAKYPEEDNSNPGFYALQAYDGIKVVIQAVERMARDKSSSPKALLREILSSSINGLSGKIHFQAGQLLQNPILRIVNVVGKSYKEIDFWTQENGFTTSLPTGKSEENATANTQSLAGVVQWPGNLERTPKGWNMPVKRNPMKIAVPGRTSFSKFVKVDYGESPDQNQYKGFCIEVFDKVLELLEYDLPYEFHPLNLTYTDLVQLVYNKTYDAVVGDVTLLAERLQYVDFTVPYAESGLSMIVPVKSQDSTWMFIKPFTWQMWAVTGAILNYTMLVVWYLERVPNPEFQGNWKRQFSTALWFTFSSLFFAHREQMHSNLSRVVMAAWLLLVMVLTSSYTASLSSMLTVQQLQPNVTSIEWLKRNNVKIGCDGDSFVRTYLEKVEKFNPENIINLSSEYNYDDAFKSNSITAAFLELPYEKVYISTYCKEYSGSAPTSRFGGLGFIFQKGSPLTKDVSKAILQLSERGELTNLEAKWLHRSNECTNNSSSNDTQSLKLKSFWVLFVISGVISTICLLFSIIQSQGFCQLTQKIVEEGNGPTSDVTMWIRTLELAKRIYGRKLIQETHLYPPDIGTQDVTDCSSRWDNVSTTDSPMHQQDTASPASTAILLTSPQPETPIETPDNR 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4833g00031 945 Gene3D - 461 571 - -
Pral4833g00031 945 Gene3D - 354 460 - -
Pral4833g00031 945 Gene3D - 158 333 - -
Pral4833g00031 945 MobiDBLite consensus disorder prediction 905 945 - -
Pral4833g00031 945 Pfam Receptor family ligand binding region 70 401 IPR001828 -
Pral4833g00031 945 Pfam Bacterial extracellular solute-binding proteins, family 3 487 798 IPR001638 -
Pral4833g00031 945 Gene3D - 749 806 - -
Pral4833g00031 945 FunFam Glutamate receptor 572 710 - -
Pral4833g00031 945 Gene3D - 572 711 - -
Pral4833g00031 945 PIRSF IGluLR_plant 11 876 IPR017103 -
Pral4833g00031 945 SUPERFAMILY Periplasmic binding protein-like I 39 454 IPR028082 -
Pral4833g00031 945 FunFam Glutamate receptor 161 332 - -
Pral4833g00031 945 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 841 IPR015683 -
Pral4833g00031 945 CDD PBP1_GABAb_receptor_plant 43 421 IPR044440 -
Pral4833g00031 945 SMART GluR_14 464 800 IPR001320 GO:0015276|GO:0016020
Pral4833g00031 945 Pfam Ligand-gated ion channel 799 829 IPR001320 GO:0015276|GO:0016020
Pral4833g00031 945 CDD GluR_Plant 461 798 - -
Pral4833g00031 945 SUPERFAMILY Periplasmic binding protein-like II 437 799 - -
Pral4833g00031 945 FunFam Glutamate receptor 462 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4833g00031 Pral-Chr4833 301468 306187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4833g00031 14 837 Ion Channels AT2G29120 32.277 4.09e-141 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4833g00031 - - gmx:100818619 1175.61