Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4833g00027 ATGGAAGTTCTTGGATGTGTGTCAAGCACCCTAGGCTTGTGTTGCTCTCTGCATGAAGTAATTAGAGAAAATTATAAACACTTCAGAGCACCCAGGAGGAGTATTCAACGACTAGATAATTTTATGCAAGAGTTGGATACTTGTAAAAGAGATGTTGAACATGAAGTAAATCGATTGTGCATTCAAAACAGAGCACGGCCAACAAATCGATGTAATTTCTGGTTTAACAGAGTTGATGGGGTAAAGACAGAAGTTAACAAGCTCTTGGATGAAAATGGCTCACATAGAGGATGCTGTTTCATTTGTTCAAGAATCAAAATGGGGAAGCTTATTGAGGAGAAGATTAGAGAAATTTGTGAACTTCGACTTGATGTTCCACATTTAGAGCATTCAATTTTTGTTCCTGTAGACAATATAGGTGATCTTTTGTCTGCAATACCAATGGTGGAATATGAAACACATAAACAAATTCTTATGAAGATTTGGGAATTCCTACTTGACAAAAAAGTCCGAAGGATTGGTGTCTGGGGAATGGGAGGAGCAGGTAAAACGACTATCATGTCAGAGATTCACAACCGCCTAGTGAAAGGAAGGAGTCAATTTAATTGCATTATTTGGGTGGAAGCGTCAAAGGATCCAAGAAAGGTGCAACAAGATATAGCTAGGAGATTAGGTTTGACTTTTCAAGATGCTGATGATGAAAGAGCAAGAGCTTCTAAATTACTAGAAGCTTTTGATAGGAAGAAGACATTTGCACTGATTTTGGATGAGGTTTGGGAGCCACTCTCTATTGAAGAAGTTGGAATTCCTTTTCCAACAGCGGAGAATGGTTGTAAATTAGTGATAATAACTCGAAGCCGTACAGTGTGCAAAGACATGGAAACAGACAAGGATGTCGAAGTGAAACTTCTTTCAGAGAATGAAGCATGGAATCTCTTCAATGACAAAGCTGGGGAACTTGTGCCATCAGATCCAGATGTACAATCAATTGCAATGGAAGTGGCAAAACAATGCTGTGGTTTGCCTCTAGCTATTGTTACAGTTGGGCGTGCATTGAGAAACACAGTCGATATAAGAGAGTGGGAGGATGCATTACAAGAGTTAAGAACTTCAACTACTAGTATTCACAACTTTGAGGAAGTAGTATATTCTCGTTTGAAGTTGAGCTATTCAAAACTAGAGGATGATGCAAGGCGGTATTGCTTTCTGTTTTGTGCTTTATACCCAAAAGGTCATCTAATTGATGAGAATGAATTGATTAATTACTGGGTATGGGAAGATTTATTAGGTGGCGGAAGCATGGTCGACATGAAACGAAAGGGGCAAAAGATTATACGCCAATTAATATCTGCTTGCTTGTTGGACTTAAAAATTGGGAATGGGGTGAGATATGTGAAATTGCATGATTTGATAAGAGATATGGCCCTCACAATCATGAGTACAAAGCGTAGATGCATTGTGAAAGCTGGCATGGGACAAGTAAAACTGCCGCCACCTCAGGAATGGAAAGAAGATGTTCAATGGGCATCATTGATGCGAAATGACGTGAAATATATAGGATTCAATCCAATGTGTCCCAGACTCACTTCTTTACTCCTTCAATGCAACTCATTTGAACAAAATATATCAGATGACTTCTTTGACAATATGCAAGGGCTAAAAGTTCTTGATCTCTCCTATACTGGGATCAGTGCTCTGCCTATGTCTCTTTCAGATTTGAAGAATCTACGTGCCTTGATATGTAGCCAATGTTGGAATCTTATTCGTGTTCCTTCTTTAGCGAGGCTCACAAAATTGGAGTATTTAGATTTTTCATTTTCTAGAAGCTTGACAGAACTTCCAGAAGGGATGGAACATTTGACCAATCTAAGACACCTGGATTTCTCCTGCACATCCGTCCAAAACTTAGGAGCTGGACTCTTGTCTAAATTTACTCTTCTAGAGGAGTTGTTAATTCTGGGTTCCCCTATGATTGGAGTATCATCTAAGAGTACAAATTCTTACTCTTATGCAGTTGGAGTTGAAGAAATTGGATACTGTCATAAGTTGTCTCTTGTGCACATGCAGCTACGTGACATTACAGCTTATAGAAGAATTGTTAAATGTCTCCAGTTTTCTCAAATGAAGGAATTCAAGCTTGTCGTTGGGTCTCTAGACGATGATGACACTTCACTATTATTAGAGAGAACTAGTTTAGCAATAGATATGGGAGAGAGACATGGAGCAAGGAACCTTTCAGAAGCAGAGATCACCGAATTGATTCCGAGAAATGTCATGGAGTTAGTAATTCATAATTCTGATCGTACGATCAAACGCTTGTCTTTGCACTTATTGGATGGAATGTGCTTGAAAACTTGTAATATCAAATGGTGTTTCGGGATGGAATGCATTCTGGAAAGTGAGGAGAACAATTTGTCACAGTTAGAGAGAATGAAACTATATGATTTGCCACACTTGAGGATGATTTGCGGGGAAGCTGTGATACCAGGTACTCTAAAGAACCTGAAGAGAATTCATGTTGAAGGATGTGACTCACTGAAATTTCTGTTCCAAAAGCAGCTCATCCTCGAACTCAAAAGTCTTGAAGAAATTAGCATCGTTCATTGCCTAGCAATGGAAGAACTTATTGAAGGAGAGAGGAATACAAATGCTAAAGGCAGCAGCCATGCAGCCAAAGTGATCCTTCTAAAATTGCAAAGGTTGAGATTGATTGATTTACCAAGACTGGAAAGCATATACAATGGGGACATTCAATGTGATTCTCTACGCACCATTGAAGTTGTTCACTGCAATGCTCTAAAGAAATTGCCTCTGGGGCTGTTCGGAATAGAGGAAGGTCAGCAAATATCACGATCAACTACAACACTAGAACAAATAGCATGTGAAACAGAGTGGTGGGAATCACTGCAGTGGGACCAGCCCCAGGCTAAGCATCTCCTTCAACCATACGTTGTCATCCATCCCTGGACCAGACATGCAGGAGGGACCCGTTTGCTCCAAGTAGCAGTCATACTTTGTGAAAGCAGCATTCAAAGGCAGCCACAGTCGCCACTTGATTTGATTCAAGTTGTGTTATTTTACTGTTAA 3087 0.3978 MEVLGCVSSTLGLCCSLHEVIRENYKHFRAPRRSIQRLDNFMQELDTCKRDVEHEVNRLCIQNRARPTNRCNFWFNRVDGVKTEVNKLLDENGSHRGCCFICSRIKMGKLIEEKIREICELRLDVPHLEHSIFVPVDNIGDLLSAIPMVEYETHKQILMKIWEFLLDKKVRRIGVWGMGGAGKTTIMSEIHNRLVKGRSQFNCIIWVEASKDPRKVQQDIARRLGLTFQDADDERARASKLLEAFDRKKTFALILDEVWEPLSIEEVGIPFPTAENGCKLVIITRSRTVCKDMETDKDVEVKLLSENEAWNLFNDKAGELVPSDPDVQSIAMEVAKQCCGLPLAIVTVGRALRNTVDIREWEDALQELRTSTTSIHNFEEVVYSRLKLSYSKLEDDARRYCFLFCALYPKGHLIDENELINYWVWEDLLGGGSMVDMKRKGQKIIRQLISACLLDLKIGNGVRYVKLHDLIRDMALTIMSTKRRCIVKAGMGQVKLPPPQEWKEDVQWASLMRNDVKYIGFNPMCPRLTSLLLQCNSFEQNISDDFFDNMQGLKVLDLSYTGISALPMSLSDLKNLRALICSQCWNLIRVPSLARLTKLEYLDFSFSRSLTELPEGMEHLTNLRHLDFSCTSVQNLGAGLLSKFTLLEELLILGSPMIGVSSKSTNSYSYAVGVEEIGYCHKLSLVHMQLRDITAYRRIVKCLQFSQMKEFKLVVGSLDDDDTSLLLERTSLAIDMGERHGARNLSEAEITELIPRNVMELVIHNSDRTIKRLSLHLLDGMCLKTCNIKWCFGMECILESEENNLSQLERMKLYDLPHLRMICGEAVIPGTLKNLKRIHVEGCDSLKFLFQKQLILELKSLEEISIVHCLAMEELIEGERNTNAKGSSHAAKVILLKLQRLRLIDLPRLESIYNGDIQCDSLRTIEVVHCNALKKLPLGLFGIEEGQQISRSTTTLEQIACETEWWESLQWDQPQAKHLLQPYVVIHPWTRHAGGTRLLQVAVILCESSIQRQPQSPLDLIQVVLFYC 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4833g00027 1028 Gene3D - 390 477 IPR036388 -
Pral4833g00027 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 405 IPR027417 -
Pral4833g00027 1028 Pfam NB-ARC domain 156 391 IPR002182 GO:0043531
Pral4833g00027 1028 Gene3D - 147 302 IPR027417 -
Pral4833g00027 1028 PRINTS Disease resistance protein signature 338 352 - -
Pral4833g00027 1028 PRINTS Disease resistance protein signature 245 259 - -
Pral4833g00027 1028 PRINTS Disease resistance protein signature 594 610 - -
Pral4833g00027 1028 PRINTS Disease resistance protein signature 172 187 - -
Pral4833g00027 1028 SUPERFAMILY L domain-like 462 939 - -
Pral4833g00027 1028 Gene3D Ribonuclease Inhibitor 491 723 IPR032675 -
Pral4833g00027 1028 FunFam Probable disease resistance protein At5g66910 303 389 - -
Pral4833g00027 1028 Gene3D Ribonuclease Inhibitor 744 961 IPR032675 -
Pral4833g00027 1028 Gene3D - 303 389 IPR042197 -
Pral4833g00027 1028 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 36 951 - -
Pral4833g00027 1028 FunFam Probable disease resistance protein At1g63360 390 477 - -
Pral4833g00027 1028 Pfam Leucine rich repeat 526 580 IPR001611 GO:0005515
Pral4833g00027 1028 FunFam Probable disease resistance protein At1g61300 147 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4833g00027 Pral-Chr4833 254778 261754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4833g00027 170 636 WRKY Transcription Factor Family AT5G45050 22.476 3.79e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4833g00027 K13459 - pcin:129285546 1215.68