Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4833g00023 ATGGAAGTTCTTGGTTGTGTGTCAAGCACCATGGGCTTGTGTTGCTCTCTGCATGAAGTAATTAGAGAAAATTATAAACACTTCAGAGCATCCAAGAGGAGTATTCGACGACTGGATAATTTGATGCAAAAGTTGGATGCTTGTAAGAAAGATGTTGAACATGAAGTAAATCGATTGTGCGGTCAAAACAGAGCAGAGCCAACAAATGAATGCGTTTTCTGGTTTGAGCGAGCTGATCAGGTAAACACAGAAGTTAGCAACCTCTTGGATGAAAATGGCTCGCATAGACCAACTAAAGGATGCTGTTTCATTTGTTCAAGAATCAAATTGGGGAAGCTTATTGGGGAGAAGATCAGAGATATTCAAGAACTTCTAGATGGTGTTCCACGTTTAGAGGATTATTCAATTGCTGTTCCTGTAAACAAGAGAGGTGATGTTTTGTCTGCAATACCAATGGTGGAATATGAAACACATAAACAAATCCTTATGGAGATTTGGGGGTTCCTACTTGACAAAAAAGCCAGAAGGATTGGTATCTGGGGAATCGGAGGAGTTGGTAAAACAACTATCATGTCAGAGATTCACAACCGCCTAGTGAAAGGAAGGAGTCAATTTAATTGCATTATTTGGGTGGAAGCGTCAAAGGATCCAAGAAAGGTGCAACAAGATATAGCTAGGAGATTAGGTTTGACTTTTCAAGATGCTGATGATGAAAGAGCAAGAGCTTCTAAATTATTAGAAGCTTTTGATAGGAAGAAGACATTTGCACTGATTTTGGATGAGGTTTGGGAGCCACTCTCTATTGAAGAAGTTGGAATTCCTTTTCCAACAGCAGAGAATGGTTGTAAATTAGTGATAATAACTCGAAGCCGTACAGTGTGCAAAGACATGGAAACAGACAAGGATGTCGAAGTGAAACTTCTTTCAGAGAATGAAGCATGGAATCTCTTCAATGACAAAGCTGGGGAACTTGTGCTATCAGATCCAGATGTACAATCAATTGCAATGGAAGTGGCAAAACAATGCTGTGGTTTGCCTCTAGCTATTGTTACAGTTGGGCGTGCATTGAGAAACACAGTCGATATAAGAGAGTGGGAGGATGCATTACAAGAGTTAAGAACTTCAACTACTAGTATTCACAACTTTGAGGAAGTAGTATATTCTCGTTTGAAGTTGAGCTATTCAAAACTAGAGGATGATGCAAGGCGGTATTGCTTTCTATTTTGTGCTTTATACCCAAAAGGTCATCTAATTGATGAGAATGAATTGATTAATTACTGGGTGTGGGAAGATTTATTGGGTGGTGGAAGCATGGCCGAGATGAAACGAAAGGGACAAAAGATTATACGACAGTTAATATCTGCTTGCTTATTGGAATTAAAAATTGAGAATGGTGTGAGATATGTGAAACTGCATGATTTGATAAGAGATATGGCCCTCACAATCATGAGTACAAAGCCTAGATGCATTGTGAAAGCTGGCATGGGACAAGTAAAACTGCCGCCACCTCAGGAATGGAAAGAAGATGTTCAATGGGCATCATTGATGCGAAATGATGTGAAATATATAAGATTCAATCCAATGTGTCCCAGACTCACTTCTTTACTCCTTCAATGCAACTCATTTGAACAAAATATATCAGATGACTTCTTTGACAATATGCAAGGGCTAAAAGTTCTTGATCTCTCCTATACTGGGATCAGAGCGCTGCCTATGTCTCTTTCAGATTTGAAGAATCTACATGCCTTGATATGTAGCCAATGTTGGAATTTTATTCGTGTTCCTTCTTTAGCGAGGCTCACAAAATTGGAGTATTTAGATTTTTCATTTTCTAGAAGCTTGACAGAACTTCCAGAAGGGATGGAACATTTGACCAATCTAAAACACCTGGATTTCTCCTTCACATCCGTCCAAAACTTAGGAGCTGGACTCTTGTCTAAATTTACTCTTCTAGAGGAGTTGTTGATTCTGGGTTCGCCTATGATGGGAGTATCATCTAAGAGTACAAATTCTTACTCTTATGCAGTTGGAGTTGAAGAAATTGGATACTGTCATAAGTTGTCTCTTGTGCACATGCAGCTACGTGACATTACAGCTTATAGAAGAATTGTTAAATGTCTCAAGTTTTCTCAATTGAAGGAGTTCAAGCTTGTCGTTGGGTCTGTAGCCGGATACGACACTTCACGATTATTTGAGAGAACTAGTTTAGCTATAGATTTGAGTGTTGGAGCAAGGAACCTTTCAAAAGCGGAGATCACCGAATTGATTCCGAGAAATGTGATGGAGTTAGTAATTCAGAATTCTCAGCATGTGATCAAACGCTTGTCTTTGCACTTATTGGATGCAATGTGCTTGAAAACTTGTGATATCACATGGTGTTTCGGGATGGAATGCATTCTGGAAAGTGTGGAGAACAATTTGTGGCGGTTAGAGAAAATGAGACTATATAATTTGCCACAACTGAGGATGATATGCGGGGAAGTTGTGAAACCAGGTACTCTAAAGAACCTGAAGAGTATTCATGTTGAAACATGTGGCTCACTGAAATTTCTGTTCCAAAAGCAGCTCATCCTCGAACTTAAAAGTCTTGAAGAAATTACGATCGTCGGTTGCCCTAGAATGGAAGAAATTATTGAAGGAGAGAGGAATACAAATGCTGAAGGCAGCAGCCATGCAGCCAAAGTGATCATTCCAAAATTGCAAAGGTTGAAATTGATTGATCTGCTAAACCTGAGAAGCATATACGATGGGGACATTCAATGTGATTCTCTACGCACCATTGAAGTTTTCCGCTGCGGTGCTCTTAATAAATTGCCTCTGGGTCTGTTCGGAATAGAGGAAGGTCAGCAAATATCACCATCAACTACTACTCTTGAACAAATATCATGTGAAACAGAGTGGTGGGAATCACTGCAGTGGGACCAACCGCAGGCTAAGCATCTCCTTCAACCATACCTTGTCGTCCATCCTGGTGGCAGACTTATTGTTAACCATATGCCTTTTAAGAAGGATTTGGGTGTTGTTGCATTTTCTCAAGAATCAAGCGAGGGCAACTCAGAGGAGAAGATCATTGATATTAATGAACTTCTAGAAACTGTTCCACGTGAAGAGTATTCCATTCCTATTCCTATAAACAAGAGAGGTGATGTTTTGTCTGCAACATCAATGATTGAATACGAAACACATAAACAAATCTTTATGAAGATTTGGGGATTTCTACTTGATGAGAATGCCAGAAGGATTGGTGTTTGGGGGATGGGAGGAGTAGGTAAAACAACTATCATGTCAGAGATTAACAATTGCCTAGTGAAAGGAAGTAGTCAATTTAATTGCACTCTTTGGGTGGAAGCGTCAAAAGATCTAAAGAAGATGCAACAAGATATTGCTGTGAAGTTGGGTTTGACTTTTCAAGAAACTGATGACGAATGA 3429 0.3957 MEVLGCVSSTMGLCCSLHEVIRENYKHFRASKRSIRRLDNLMQKLDACKKDVEHEVNRLCGQNRAEPTNECVFWFERADQVNTEVSNLLDENGSHRPTKGCCFICSRIKLGKLIGEKIRDIQELLDGVPRLEDYSIAVPVNKRGDVLSAIPMVEYETHKQILMEIWGFLLDKKARRIGIWGIGGVGKTTIMSEIHNRLVKGRSQFNCIIWVEASKDPRKVQQDIARRLGLTFQDADDERARASKLLEAFDRKKTFALILDEVWEPLSIEEVGIPFPTAENGCKLVIITRSRTVCKDMETDKDVEVKLLSENEAWNLFNDKAGELVLSDPDVQSIAMEVAKQCCGLPLAIVTVGRALRNTVDIREWEDALQELRTSTTSIHNFEEVVYSRLKLSYSKLEDDARRYCFLFCALYPKGHLIDENELINYWVWEDLLGGGSMAEMKRKGQKIIRQLISACLLELKIENGVRYVKLHDLIRDMALTIMSTKPRCIVKAGMGQVKLPPPQEWKEDVQWASLMRNDVKYIRFNPMCPRLTSLLLQCNSFEQNISDDFFDNMQGLKVLDLSYTGIRALPMSLSDLKNLHALICSQCWNFIRVPSLARLTKLEYLDFSFSRSLTELPEGMEHLTNLKHLDFSFTSVQNLGAGLLSKFTLLEELLILGSPMMGVSSKSTNSYSYAVGVEEIGYCHKLSLVHMQLRDITAYRRIVKCLKFSQLKEFKLVVGSVAGYDTSRLFERTSLAIDLSVGARNLSKAEITELIPRNVMELVIQNSQHVIKRLSLHLLDAMCLKTCDITWCFGMECILESVENNLWRLEKMRLYNLPQLRMICGEVVKPGTLKNLKSIHVETCGSLKFLFQKQLILELKSLEEITIVGCPRMEEIIEGERNTNAEGSSHAAKVIIPKLQRLKLIDLLNLRSIYDGDIQCDSLRTIEVFRCGALNKLPLGLFGIEEGQQISPSTTTLEQISCETEWWESLQWDQPQAKHLLQPYLVVHPGGRLIVNHMPFKKDLGVVAFSQESSEGNSEEKIIDINELLETVPREEYSIPIPINKRGDVLSATSMIEYETHKQIFMKIWGFLLDENARRIGVWGMGGVGKTTIMSEINNCLVKGSSQFNCTLWVEASKDLKKMQQDIAVKLGLTFQETDDE 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4833g00023 1142 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1019 1139 - -
Pral4833g00023 1142 Pfam NB-ARC domain 1066 1138 IPR002182 GO:0043531
Pral4833g00023 1142 Pfam NB-ARC domain 161 395 IPR002182 GO:0043531
Pral4833g00023 1142 Gene3D - 151 306 IPR027417 -
Pral4833g00023 1142 PRINTS Disease resistance protein signature 176 191 - -
Pral4833g00023 1142 PRINTS Disease resistance protein signature 598 614 - -
Pral4833g00023 1142 PRINTS Disease resistance protein signature 249 263 - -
Pral4833g00023 1142 PRINTS Disease resistance protein signature 342 356 - -
Pral4833g00023 1142 FunFam Probable disease resistance protein At1g61300 150 302 - -
Pral4833g00023 1142 FunFam Probable disease resistance protein At5g66910 307 393 - -
Pral4833g00023 1142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1061 1138 IPR027417 -
Pral4833g00023 1142 SMART AAA_5 173 309 IPR003593 GO:0016887
Pral4833g00023 1142 Gene3D - 307 393 IPR042197 -
Pral4833g00023 1142 Gene3D - 394 481 IPR036388 -
Pral4833g00023 1142 FunFam Probable disease resistance protein At1g63360 394 481 - -
Pral4833g00023 1142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 409 IPR027417 -
Pral4833g00023 1142 Gene3D - 1045 1142 IPR027417 -
Pral4833g00023 1142 Gene3D Ribonuclease Inhibitor 744 962 IPR032675 -
Pral4833g00023 1142 Gene3D Ribonuclease Inhibitor 497 727 IPR032675 -
Pral4833g00023 1142 Pfam Leucine rich repeat 530 583 IPR001611 GO:0005515
Pral4833g00023 1142 Coils Coil 38 58 - -
Pral4833g00023 1142 SUPERFAMILY L domain-like 466 959 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4833g00023 Pral-Chr4833 199527 216235 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4833g00023 175 488 WRKY Transcription Factor Family AT5G45050 25.625 3.77e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4833g00023 K13459 - pcin:129285546 1266.91