Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4833g00020 ATGGAAGTTGTTGCAAGTGTGTCAAGCATCATAGGCTTGTGTTGCTCTCTGCATGAAGTATTTAGAAACAGTTGTAAACACTTGATTACACCCAGGAGGAGGATTCGGCAGCTGCGTAATTTGATGCGCCAATTGGATGCTCGTAAAAAGGATGCAATAAGAGAAGTTGTTAGTCTCATAACTGAAAATGGCCTGCATAGACCAACTATAGGGTGTTGTTGCATTTGCTCAAGAATCAAGCGAGGGGAACTCATAGAGGAGAAGATCATTGATATTAATGAACTTCTAGAAACTGTTCCACGTGAAGAGTATTCCATTCCTATTCCTATAAACAAGAGAGGTGATGTTTTGTCTGCAACACCAATGATTGAATACGAAACACATAAACAAATCTTTATGAAGATTTGGGGATTTCTACTTGATGAGAATGCCAGAAGGATTGGTGTTTGGGGGATGGGAGGAGCAAGTAAAACAACTATCATGTCAGAGATTAACAATTGCCTAGTGAAAGGAAGTAGTCAATTTAATTGCACTATTTGGGTGGAAGCGTCAAAAGATCTAAAGAAGATGCGACAAGATATTGCTGTGAAGTTGGGTTTGACTTTTCAAGAAACTGATGACGAACGAGCAAGAGCTTCAAAACTGTTAGAAGCTTTTAAAAGGAGGAAGGCATTTGCACTTATACTAGATGATGTTTGGGAACCATTCTCTATTGAAGAAGTAGGAATTCCTGTGCCAACGGTAGAGAAGGGCTGTAAATTAGTGATAATAACTCGAAACCTTATGGTGTGCAGAGTGATGGAAATAGACAAGGATGTCGAAGTTAAAGTTCTTGAAGATGATGAAGCGTGGAATCTCTTTAAGGACAAAGTTGGTGAGGAACGTGTGCTATCAGATCCAGATTTGCAATCAATTGCCATGGAAGTGGCCAAAAAATGTGGTGGTTTGCCTCTACCTATCATTGCAATTGGATGTGCATTGAGGAACACAACTAGTATAAGAGAGTGGCAGAATGCATTAGAAGAGTTAAGAACCTCAAGTGATGGTATATACAACATTGATGAAGCAGTATGTTCTCATTTGAAGTTGAGCTATTCAAAACTAAAGGATGATACAAGGCAATCTTGCTTTCTATTTTGTGCTTTATACCCAAAAGGTCATCTAATTGATGAGAACGAATTGATTAATTATTGGGTGTGGGAAGATTTATTGGGTGATGTGAACATGTCTGCGACAAAACAAAAGGGGCAGATGATTATAGATGAATTAATATCCGCTTGCTTGTCAGAATTAAAAATTGAGAATGGGGTGAGATGTGTCAAATTGCATGATTTGATAAAGAGATATGCTGTTACAATCATGAGTAAAAATTCTAGATGCATTGTGAATGCTGGCATGGGACAAGTTAGACCACCACTGCCTCACGAATGGAAAGAAGATGTTCAATGGGTATCATTAATGAGAAATGATGTGAAATCTATTGACTTCAGTCCAATGTGTCCTGGAATCACTTCTTTGCTGCTTCAATATAACTCATTTGAAAAAAATATATTGGATCACTTCTTTGACAGCATGGAAGGGTTAAAAGTTCTTGATCTCTCCTGCTCTGCCTATGTCTCTTTTGAATTTGAAGAATCTATGTGCCTTGATATTAAGCCACTGTTGGAATCTTATTCAAGTTCCATCTTTAGCAAGGCTCACTATATCGAAATACTTAGATTTTTCATTTTCTGGACGTTTAACAGAACTTCCACAAGGGATGGAACAATTGACCAATTTGAGACACCTGGATTTCTTCACATCCGTTCAAAGCTTAGGAGCTGGGGTCGTATCGAGATTTAA 1842 0.3822 MEVVASVSSIIGLCCSLHEVFRNSCKHLITPRRRIRQLRNLMRQLDARKKDAIREVVSLITENGLHRPTIGCCCICSRIKRGELIEEKIIDINELLETVPREEYSIPIPINKRGDVLSATPMIEYETHKQIFMKIWGFLLDENARRIGVWGMGGASKTTIMSEINNCLVKGSSQFNCTIWVEASKDLKKMRQDIAVKLGLTFQETDDERARASKLLEAFKRRKAFALILDDVWEPFSIEEVGIPVPTVEKGCKLVIITRNLMVCRVMEIDKDVEVKVLEDDEAWNLFKDKVGEERVLSDPDLQSIAMEVAKKCGGLPLPIIAIGCALRNTTSIREWQNALEELRTSSDGIYNIDEAVCSHLKLSYSKLKDDTRQSCFLFCALYPKGHLIDENELINYWVWEDLLGDVNMSATKQKGQMIIDELISACLSELKIENGVRCVKLHDLIKRYAVTIMSKNSRCIVNAGMGQVRPPLPHEWKEDVQWVSLMRNDVKSIDFSPMCPGITSLLLQYNSFEKNILDHFFDSMEGLKVLDLSCSAYVSFEFEESMCLDIKPLLESYSSSIFSKAHYIEILRFFIFWTFNRTSTRDGTIDQFETPGFLHIRSKLRSWGRIEI 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4833g00020 613 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 59 553 - -
Pral4833g00020 613 Gene3D - 365 452 IPR036388 -
Pral4833g00020 613 Gene3D - 111 274 IPR027417 -
Pral4833g00020 613 FunFam Probable disease resistance protein At1g61300 119 272 - -
Pral4833g00020 613 Gene3D Ribonuclease Inhibitor 457 579 IPR032675 -
Pral4833g00020 613 FunFam Probable disease resistance protein At5g66910 277 364 - -
Pral4833g00020 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 380 IPR027417 -
Pral4833g00020 613 Pfam NB-ARC domain 132 366 IPR002182 GO:0043531
Pral4833g00020 613 Coils Coil 35 62 - -
Pral4833g00020 613 Gene3D - 277 364 IPR042197 -
Pral4833g00020 613 PRINTS Disease resistance protein signature 523 539 - -
Pral4833g00020 613 PRINTS Disease resistance protein signature 146 161 - -
Pral4833g00020 613 PRINTS Disease resistance protein signature 313 327 - -
Pral4833g00020 613 PRINTS Disease resistance protein signature 219 233 - -
Pral4833g00020 613 SUPERFAMILY L domain-like 479 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4833g00020 Pral-Chr4833 160135 162063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4833g00020 143 383 WRKY Transcription Factor Family AT4G12020 28.287 1.34e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4833g00020 K13459 - pcin:129285546 743.036