Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4833g00016 ATGAATACAGATCGAAGCCTTTTGCTTCTTTTTGCTGAGTTCAGTTCCATTATTCTCCTTCTCAGTTGCTTCCCAGAAGCCGCAGCAGATAACAGTAATGGAATCAATATCGATGTTGGTGCAATTATCGATGTCAATTCTCATGCAGGAATACAACAGAAAGCAGCCATGGAAATTGCAGCACAAAGCTTTAACAACTACTCAAAGAGCCTCAACATCTCCCTCCATTTTCGTGACTCTCTAAGCAATCCATTGCAGGCAGCTTCTGCAGCTGAAGAGCTGATAAATAAAACGAAAGTTGAAGTTATAATTGGAATGGAGAAATGGAAGGAAGCAGCTTTTGTAGCTGAACTTGGAGATAAAGCTCAAGTTCCAGTAATTTCATTCTCATCTCCTTCAATATCCTCACCACCATCATCAATCCAATTTCGTTGGCCTTTTTTGATTCAAATGGCCAAGAATCAGACTGCAAATATGAACTGCATAGCTGATATTGTTCACGCATATGGCTGGCAGAAGGTTATAGCTATATACGAAGATGATTCTTATAGTTCTGATTCTTCAGGCATGTTAACCCTCCTTTCTGAAGCCCTCTTGAAGACTAATTCCCAAATTGAGCGTAGACTTGTCCTCCCACCATTTTCTTCTTTATCTGATCCAAAAGGGTTTGTTCTTGATGAACTGATTAGCTTATTATTATCAGCACAATCTAGGGTTTTCATTATTCTCAAAGCATCAGTGCCTATGGTGACCCATTTGTTTAGAGAAGCTAGGAAACTAAGGTTATTAGGGAAAGAATCAGCTTGGATTATTAATGAGGATATTGCTGGTATGCTTGACTCAGTCGATGAGAATGTCTTATCCTCCATGGAAGGTACTATTGGAATCAAAAGCTACTATTCTACAAGTTCAAGTGCTTATACTCAGTTCATAGAAAACTTTCAAAACCACTCTAATAATCCGGGATTCCTTGCACTGCAAGCTTATGATAGCATCAGGATCGTTACAAAAGCCCTAGAGAAGATGAATGGTACTAACAATAATAATAATAATAACAACAATCATCATCCCAGTAACTCGAGACTGTTCACGGAGACGATGCTGTCTAGTAACTTCACTGGTTTAACTGGTAACATAAGCTTCAAGGAAGGCCGTTTATCACAAAGTCCATTGTTACGAGTGATAAACGTGGTTAACAAGAAATACACAGAGTTGGACTTTTGGGTACCAAATTTGAAGTTCTTCAAATCTCTGCAAGACATAGATCAGAAAGGAAGTGATGCTGCTACACTTCATATAAATGGTCCAGTGGTTTGGCCTGGAGGTCTAAAGACTGATCTAAACAATAATTTTAATGCTCCATTAGGGTGGGACATACCTTCGGACGAGAATCCATTAAGAGTAGCAGTTCCTGTAAAGCCTGCTTTCGAGAATTTTGTGAAGGAAGAATCTCATGGCAGATATGTTGGCCTTTGTATTGAACTTTTTGAAAAAGTTCAAGAACAGCTCAAACATAAGTACTCCGGTCTTCCATATAAATATTTCCCCTTCGATGATGTATCTTATGATGTGCTTCTACGAAAATTCACCGACCAGCAGTCATATGATGCTATTGTTGGAGACGTAACAATACTGGAGAATCGATCGAAGAATGTATCATTCACACAGCCATACTCGGAGTCAGGTTTGTCTCTCATATTTCCAGCTGAGACAGAAGGGACGACGTTTCTGTTCGTGAAGCCATTTAGCTGGCAAATGTGGCTAGCCACTGCTGTCATATTCTCATACACAACGCTTGCCATTTGGTTCCTTGAGCATCCCTTAAACCCTAGCTATAAAGGATCATGGAAAAATCAACTCAGCAACACTTCTTGGTTCGCCTTTTCTTCCCTATTTTTTGCTCACGGGGGCAAAGTGTACAGTAACTCAGCAAGGGTGGTGGTTGCTGCATGGCTATTTCTGGTGTTTGTTCTGACTTCAAGTTACACAGCAAGTCTGTCTTCTCTGCTCACTGTGAAACGGATGAAGACTGGGAGAGACGTACAGTGGCTGAAGGAAAATAAGTTAACTGTTGGCTGTGATAATAGCAGTCAATTTGTGAAGAACTACTTGCTCCATGTCTATGATTTACCTGAAAAGCAGATCCTAAGTCTTGATGGTGAGCCTGACTTTGTAGCCAAGTTTAAGAGCAAACAAATTTCTGCCCTCTTCCTTGAGAGCCCATATGAAAAGGTTTTCTTAAACAAGTATTGCAATCAATATACTGCAACTCCTGCTGGCTATAAATTTGGAGGCCTCGGCTTTGTATTCCAAAAAGACTCTCCGTTGGTTAAAGACTTTTCTGAAGGTATTTTAAGATTAGCGGAGAATGGAACTTTAAGGAGGTTGGAAGACAAATGGTTGATCCCTTCCAATAACTGCTCAAGCGACTCAACGTCATCTTCTGAAACTGAAAGCCTAACCCTAGCCGACTTTTGGATTCTCTATGTGATAAGTGGTTTCACTTCCACCATCTTCTTGATCGTTGCTCTGTTGAGGACTTACCTTCATCAAGAGAAAGAAGGTGATCAAGACAATAATAATAATAATACAGAAGCTTCCGATGATAATGGTGTTTGGAACAAGGCACTAGTGAGACTCACTTCAGGCCTTTACAACAATGGCAGCTTCAATTTCAACACTATAGGAAGAGCTGCAACTTTTGGTGGAACAGACACTGTTCGACATTGGAATTCTTCGAGGTGGGAGAGTGTAAGAACTTCTGATGATCATGATCACGTTAATCCTCGACGGACCCAATCAGTTGGCTTAGAGATGTTATAG 2823 0.4035 MNTDRSLLLLFAEFSSIILLLSCFPEAAADNSNGINIDVGAIIDVNSHAGIQQKAAMEIAAQSFNNYSKSLNISLHFRDSLSNPLQAASAAEELINKTKVEVIIGMEKWKEAAFVAELGDKAQVPVISFSSPSISSPPSSIQFRWPFLIQMAKNQTANMNCIADIVHAYGWQKVIAIYEDDSYSSDSSGMLTLLSEALLKTNSQIERRLVLPPFSSLSDPKGFVLDELISLLLSAQSRVFIILKASVPMVTHLFREARKLRLLGKESAWIINEDIAGMLDSVDENVLSSMEGTIGIKSYYSTSSSAYTQFIENFQNHSNNPGFLALQAYDSIRIVTKALEKMNGTNNNNNNNNNHHPSNSRLFTETMLSSNFTGLTGNISFKEGRLSQSPLLRVINVVNKKYTELDFWVPNLKFFKSLQDIDQKGSDAATLHINGPVVWPGGLKTDLNNNFNAPLGWDIPSDENPLRVAVPVKPAFENFVKEESHGRYVGLCIELFEKVQEQLKHKYSGLPYKYFPFDDVSYDVLLRKFTDQQSYDAIVGDVTILENRSKNVSFTQPYSESGLSLIFPAETEGTTFLFVKPFSWQMWLATAVIFSYTTLAIWFLEHPLNPSYKGSWKNQLSNTSWFAFSSLFFAHGGKVYSNSARVVVAAWLFLVFVLTSSYTASLSSLLTVKRMKTGRDVQWLKENKLTVGCDNSSQFVKNYLLHVYDLPEKQILSLDGEPDFVAKFKSKQISALFLESPYEKVFLNKYCNQYTATPAGYKFGGLGFVFQKDSPLVKDFSEGILRLAENGTLRRLEDKWLIPSNNCSSDSTSSSETESLTLADFWILYVISGFTSTIFLIVALLRTYLHQEKEGDQDNNNNNTEASDDNGVWNKALVRLTSGLYNNGSFNFNTIGRAATFGGTDTVRHWNSSRWESVRTSDDHDHVNPRRTQSVGLEML 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4833g00016 940 Gene3D - 461 575 - -
Pral4833g00016 940 FunFam Glutamate receptor 575 705 - -
Pral4833g00016 940 FunFam Glutamate receptor 158 321 - -
Pral4833g00016 940 Pfam Ligand-gated ion channel 802 834 IPR001320 GO:0015276|GO:0016020
Pral4833g00016 940 SUPERFAMILY Periplasmic binding protein-like II 456 801 - -
Pral4833g00016 940 Pfam Receptor family ligand binding region 53 398 IPR001828 -
Pral4833g00016 940 Gene3D - 44 389 - -
Pral4833g00016 940 SUPERFAMILY Periplasmic binding protein-like I 36 409 IPR028082 -
Pral4833g00016 940 SMART GluR_14 467 803 IPR001320 GO:0015276|GO:0016020
Pral4833g00016 940 Gene3D - 576 703 - -
Pral4833g00016 940 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 864 IPR015683 -
Pral4833g00016 940 Gene3D - 725 764 - -
Pral4833g00016 940 PIRSF IGluLR_plant 9 894 IPR017103 -
Pral4833g00016 940 Pfam Bacterial extracellular solute-binding proteins, family 3 473 801 IPR001638 -
Pral4833g00016 940 MobiDBLite consensus disorder prediction 919 940 - -
Pral4833g00016 940 Gene3D - 765 800 - -
Pral4833g00016 940 Gene3D - 154 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4833g00016 Pral-Chr4833 111809 116436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4833g00016 3 863 Ion Channels AT2G29120 30.527 1.16e-118 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4833g00016 - - pcin:129285797 1336.24