Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4832g00026 ATGGACAAGTTTTTGGCGCTAATTTGCCCTAATTCTCCATCCGTATGGGATGGAAAGGGCTTCTCAGCGTGTTTCGAAGATATGGTTTTAGGTTTTGGACTGAATGCAGCGACTATTGGTATAATTGTTGTGCTTGGATGCATTCACAAGAGCAGCCGAGGAATTCAAAGATCAGACACGCAGATGGCCCTTTTGCAGAAGCTTTTCCTGCATCTTATACCAGCTGTTGGAGCATGTGCTTCGTTGTTGGACACAATTTTTCTATGGAAGAGAGAAATTAACAGGCACTTTGCTGGATATCATAAGTGGTTTTATAGCTGTTCAGAGTTGATGGTGTGGACAAATATCATTCTCTTCTCACCGTGTGTCAGCAGTCATTACATGCTATGCAACTATGTCCTTTGTTACTGGTGGATTATGAAACCACTATTCTGGATCTTCCATTTGCTTACAAAGTTCCCATTGTTGGAGACTTCAATATGTGTTGTGGAAAGCTTTATTCTTCTGCTGAATATCACATTTGGCATATCTATCAATGTCATAAGAATAAAGATATTGTCTTCCAAAACCAGTTCACTTGAAGATCCACTTCTTTCCAACCATATGGACCTTGAGGAAGGTTGCCATCGTGATCTTGGAAAATCTAGGAACTTCTGTGATTTGATGACTTTCAAATTCATAAATCCTGTAATGAACCATGGTGTGGTTAAACAACTGGACTTTGAAGATCTGCTGGAACTACCTCCAGATTTGGATCCTTCTTCCTGTCATGATATACTTTTCACCTGCTGGGAAGCACAACTGAGCAATAATGGTTCAAACCCATCTTTACTTAGAGCAGTATGCTGTGCATATGGATGGCCATATCTCCGCCTAGGTTTATTGAAGGTGGTTAATGATTGTATTGGTTTTGCGGGACCATTGCTTCTCAATAAGCTGATCCGGTTTCTTCAACAAGGTTCGGAGAGTTTGGATGGATATTTACTTGCTATATCCTTGGGCCTCACATCTGTAATTAAATCCTTCTTAGATACACAATATAGTTTTCATCTTGGCAAGCTGAAGCTAAGGCTACGATCTAGCATCATGACTCTAATCTATCAAAAGTGTCTGTGTGTGAACTTAGCGGAGCGTTCAAAATTCTCTAATGGAGAGATTCAGACATTTATGTCTGTGGATGCTGACCGAACTGTCAACATGTGTAATAGTTTCCATGATGTGTGGAGCTTGCCTTTACAAATTGGAGTGGCGCTATATCTTTTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCAATTACCATTTTGTTGATACCAGTCAATAAATGGATTTCAAAATTGATTGCAAGTGCAACTGAGAAAATGATGAAGCAGAAGGATGAAAGGATACGGAGGACAGGGGAACTTTTGACTTATATTCGCACTTTGAAGATGAATGCATGGGAACTTCTTTTTTCTGGTTGGCTGATGGAGACAAGATCTTCTGAAGTGAAACACTTGGCTACCCGGAAGTACCTGGATGCATGGTGTGTATTCTTTTGGGCCACAACGCCAACTCTCTTTTCTCTTTTCACATTTGGACTCTATGCATTGCTGGGGCACCAACTTGATGCTGCAATGGTGTTCACTTGTCTGGCATTGTTTAACACATTAATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCAATTGTATCCTCCAGACGGTTGAGCAGGTTTCTTTCTTGTCCTCAAAATAAATCTAAGGTGAAAGAGACCAATTCATGTTCCTTGCCATACCATAGTGAACAGCCTGACTCTTCGCAAGGTTTGGCAGTCTTCGTCCAAGATGCTTGTTGTACTTGGTCAAGCAGTGATGAAGAGACATTAAATTTGGTGTTGAACCATGTCAATCTAAGCCTGTCAAGGGGTTCCTTTGTTGCAGTGGTAGGAGAGGTTGGTTCAGGTAAATCATCATTGCTATATTCGATTCTTGGAGAAACACGGGCAGTTCATGGATCAATTCACTCCGATGGATCAGTAGCATATGTACCCCAGGTCCCATGGATTTTATCTGGAACAATACGTGACAACATAATATTTGGGAAAAATTATGATCCCAAAAGGTATGCAGAAACTGTTCAAGCATGTGCTCTAGCTGTTGATATCTCATTGATGGTTGGAGGTGACATGACTTACATTGGGGAAAAGGGAGTCAACTTATCTGGTGGACAGAGAACACGTCTTGCTTTAGCCAGGGCATTGTATCATGGCTCTGATGTGATTATGCTTGATGATGTCCTGAGTACAGTTGATGCACAAGTTGCTCAATGGATCTTACACAATGCCATTCTAGGTCCACTTGTGCAGGGAAAAACTCGATTGCTCTGTACCCATAATATACAGGCCATATCCTCTGCTGAGATGGTTGTTATAATGGACAAAGGACGCATAAAGTGGGTGGGAAGTCCTAATGACCACCAAGTCTACTCATATATAACATTCTCCCCGTTGAATGAACTTGATACGGCTGTACAGAATCAAGGAAAATCTTGCTGCACAAATTCTTCCACATTAAAAGATCTCCCAGATAGTGAAATTAAACATGTTGCGGAGGGAGCAGAGGAGATCATTGAAGCTGAGTCAAGGAAAGAGGGAAAAGTGGAACCTGGAGTGTATAAAAACTACGCTATGTACACTGGCTGGTTCATTACAGTTGTAATATGCCTGTCAGCTGTTCTAATGCAAGCTTCTCGTAATGGAAATGATTTATGGCTGTCATTTTGGGTTGATACGACACACAGCAGTCAAACAAGATACTCTCTGCCCTTTTATCTGGCTATACTGGGTCTCTTTTGCATCATAAATTCTTTTTTCACATTGGTGAGGGCGTTCTCTTTTGCATTTGGTGGCTTACAAGCAGCAATTAAAGTGCACAACAAAATGCTTGGTAATCTTATCAATGCACCTGTGCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTCAACAGGTTTTCCTCGGATCTTTATACAATTGATGACTCCCTTCCATTCATTATGAACATTCTCCTGGCTAATTTTGTTGGCCTCTTGGGCATTGCAGTAGTTTTGTCATATGTTCAGGTCTTTTTCTTAATCCTGCTATTGCCGTTTTGGTTTATCTACAGTAGACTCCAGTTCTTCTACAGGTCAACATCAAGGGAACTACGACGACTTGACAGTGTTTCTCGTTCTCCAATTTATACATCTTTCACGGAAACTCTTGATGGATCATCAACTATTAGAGCATTTAAACTTGAGGACTTATTTTTTTCCAAGTTCACTGAACACGTAACATTGTATCAGAAGACTTCTTTCACAGAGATAGCAGCCAGTTTATGGCTTTCCTTACGTCTTCAATTATTAGCTGCATCTATCATCTCATTTATTGCACTGATGGCTGTGGTTGGAGGTCATGGCAGTCTGCCAATCAGCTTTGGCACCCCTGGGCTGGTAGGTTTGGCACTCTCATATGCGGCTCCAATAGTGTCCTTGCTGGGAAGCTTTTTAACAAGTTTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGTCCTTGAATATATGGACATTCCTCAGGAGGAAATTGCTGGACGCCTATTCATGAATCCAGATTGGCCAAATCAAGGCGTAATTGAGTTCCAAAATGTAACTTTAAAATACAAGCCATCTTTGCCACCTGCACTCTGCAATCTTAGTTTCACAATTGCTGGAGGGTCCCAGATTGGAATTATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTGAATGCCCTTTTCCGCCTTACCCCAATATGTACAGGATCTATATTCATTGATGGCATAAACATTAGCAACATTCCTGTCAGAGAACTACGTTCTCGTTTGGCTGTTGTTCCTCAGAGTCCATTCCTATTCGAAGGATCATTAAGGGATAATCTGGACCCCTTCCAAGTGCACGATGACTTGATAATTTGGAATGCTCTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGCAGCTGGAGGGCTACATATTCTCGTAAAGGAATCTGGGATGTCATTTTCAGTTGGCCAAAGGCAGCTTCTTTGCCTTGCACGTGCTCTTCTCAAATCTTCAAAGGTTCTATGTTTGGATGAATGTACAGCCAATGTGGACACACAAACTGCTTCGCTGCTGCAAAGTACTATAGCTGAAGAATGCAAGGGCATAACAGTGATTACAATAGCTCACCGGATATCGACAGTTTTGAATATGGACAACATTTTAATTCTTGACCATGGGAACCTGGCTGAACAAGGAAACCCCCAGGTTCTACTGAAACATGAATCCTTATTCTCCAGCTTTGCAAAAGCTTCATCAATGTGA 4392 0.4123 MDKFLALICPNSPSVWDGKGFSACFEDMVLGFGLNAATIGIIVVLGCIHKSSRGIQRSDTQMALLQKLFLHLIPAVGACASLLDTIFLWKREINRHFAGYHKWFYSCSELMVWTNIILFSPCVSSHYMLCNYVLCYWWIMKPLFWIFHLLTKFPLLETSICVVESFILLLNITFGISINVIRIKILSSKTSSLEDPLLSNHMDLEEGCHRDLGKSRNFCDLMTFKFINPVMNHGVVKQLDFEDLLELPPDLDPSSCHDILFTCWEAQLSNNGSNPSLLRAVCCAYGWPYLRLGLLKVVNDCIGFAGPLLLNKLIRFLQQGSESLDGYLLAISLGLTSVIKSFLDTQYSFHLGKLKLRLRSSIMTLIYQKCLCVNLAERSKFSNGEIQTFMSVDADRTVNMCNSFHDVWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISKLIASATEKMMKQKDERIRRTGELLTYIRTLKMNAWELLFSGWLMETRSSEVKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALLGHQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAIVSSRRLSRFLSCPQNKSKVKETNSCSLPYHSEQPDSSQGLAVFVQDACCTWSSSDEETLNLVLNHVNLSLSRGSFVAVVGEVGSGKSSLLYSILGETRAVHGSIHSDGSVAYVPQVPWILSGTIRDNIIFGKNYDPKRYAETVQACALAVDISLMVGGDMTYIGEKGVNLSGGQRTRLALARALYHGSDVIMLDDVLSTVDAQVAQWILHNAILGPLVQGKTRLLCTHNIQAISSAEMVVIMDKGRIKWVGSPNDHQVYSYITFSPLNELDTAVQNQGKSCCTNSSTLKDLPDSEIKHVAEGAEEIIEAESRKEGKVEPGVYKNYAMYTGWFITVVICLSAVLMQASRNGNDLWLSFWVDTTHSSQTRYSLPFYLAILGLFCIINSFFTLVRAFSFAFGGLQAAIKVHNKMLGNLINAPVQFFDQTPGGRILNRFSSDLYTIDDSLPFIMNILLANFVGLLGIAVVLSYVQVFFLILLLPFWFIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKLEDLFFSKFTEHVTLYQKTSFTEIAASLWLSLRLQLLAASIISFIALMAVVGGHGSLPISFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERVLEYMDIPQEEIAGRLFMNPDWPNQGVIEFQNVTLKYKPSLPPALCNLSFTIAGGSQIGIIGRTGAGKSSVLNALFRLTPICTGSIFIDGINISNIPVRELRSRLAVVPQSPFLFEGSLRDNLDPFQVHDDLIIWNALEKCHVKEEVEAAGGLHILVKESGMSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTIAEECKGITVITIAHRISTVLNMDNILILDHGNLAEQGNPQVLLKHESLFSSFAKASSM 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4832g00026 1463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 294 569 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4832g00026 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1227 1460 IPR003439 GO:0005524
Pral4832g00026 1463 Gene3D - 586 839 IPR027417 -
Pral4832g00026 1463 CDD ABCC_MRP_domain2 1225 1444 - -
Pral4832g00026 1463 FunFam ATP-binding cassette subfamily C member 10 269 586 - -
Pral4832g00026 1463 Pfam ABC transporter 634 766 IPR003439 GO:0005524
Pral4832g00026 1463 CDD ABCC_MRP_domain1 615 817 - -
Pral4832g00026 1463 ProSitePatterns ABC transporters family signature. 1363 1377 IPR017871 GO:0005524|GO:0016887
Pral4832g00026 1463 SMART AAA_5 1253 1437 IPR003593 GO:0016887
Pral4832g00026 1463 SMART AAA_5 643 817 IPR003593 GO:0016887
Pral4832g00026 1463 Pfam ABC transporter 1245 1391 IPR003439 GO:0005524
Pral4832g00026 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 629 826 IPR027417 -
Pral4832g00026 1463 SUPERFAMILY ABC transporter transmembrane region 902 1209 IPR036640 GO:0005524|GO:0016020
Pral4832g00026 1463 CDD ABC_6TM_MRP7_D1_like 292 577 - -
Pral4832g00026 1463 Gene3D ABC transporter type 1, transmembrane domain 871 1210 IPR036640 GO:0005524|GO:0016020
Pral4832g00026 1463 FunFam ABC transporter C family member 5 870 1210 - -
Pral4832g00026 1463 SUPERFAMILY ABC transporter transmembrane region 279 577 IPR036640 GO:0005524|GO:0016020
Pral4832g00026 1463 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Pral4832g00026 1463 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 215 1460 - -
Pral4832g00026 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 613 840 IPR003439 GO:0005524
Pral4832g00026 1463 CDD ABC_6TM_MRP7_D2_like 905 1204 - -
Pral4832g00026 1463 FunFam ATP-binding cassette (ABC) transporter, putative 1215 1460 - -
Pral4832g00026 1463 Gene3D - 1213 1458 IPR027417 -
Pral4832g00026 1463 Gene3D ABC transporter type 1, transmembrane domain 280 585 IPR036640 GO:0005524|GO:0016020
Pral4832g00026 1463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 906 1192 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4832g00026 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1221 1458 IPR027417 -
Pral4832g00026 1463 FunFam ABC transporter C family member 13 594 850 - -
Pral4832g00026 1463 Pfam ABC transporter transmembrane region 293 557 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4832g00026 1463 Pfam ABC transporter transmembrane region 907 1150 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4832g00026 Pral-Chr4832 203924 222312 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4832g00026 633 858 Calmodulin-binding Proteins AT2G36910 28.340 3.66e-19 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4832g00026 K05674 - gmx:100814181 2294.62