Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4832g00017 ATGAATAGCTCAATTTATGAGGAAGATTTCCTCAGGCAGATCCTTCACCAACCTTCTTTCCCTTCCATGACTGACACTACTCACTCTCCCCTCATCGAAACCAACACATTCACCACCACAGATGTGGGCGGTGCCGCCGCAGCCAGTAGCTTATCCTTGAATGACTCCGGCGCCTGCCAATCCAAGCGTAACAGTCCGAGCCCGATCATCTCTGGACTTGCTAGTTTCTCTGACAAACCGGCAACCTCATCATCATCTACTCAGTCAACTTACATTCTATCTTTTGATAACTCAACGTTAATACCTGGAAACACGCGTGCTTCGCTGAAACGGACTCCAGAAAACAATAACAACAGTGAGTCAAAGGCCAATCAAAGGACAAGGAAGAGTAGAAGTTCATCTGATTCATTGAATCACATTATGTCTGAGAGAAAAAGGAGACAAGAACTCACTGAGAAGTTTATTGCACTCTCAGCCACAATCCCTGGTTTGAAGAAGATTGACAAGTCCTCCGTACTAAGCGAAGCTATCAATCACATGAAGAAACTTAAAGAACGAGTAAGAGAGTTAGAGGAAGAGAACAAGAAGATAAGTGGCGAGTTATTATTATCAATGTCAGGCCTGAAGAAATCATCCCTCCTCAACTCATCATCAGAAGATCATCATCAAGACACAATATCTTCGGAAACAGTGAGTTTTGATGATTGCTTCAGAATGAACGAAGCACTGCCTGAAGTTGAAGCAAGAGTTTTACACAACCAAGTTCTCATCAGAATCCACTGTGAGAAGCAAAAATGTGTTCTCCTTAATATATTGGCGTATCTCAGGAGTCTCCATTTCTCCATAACCAGCACTAGCGTCTTAACCTTTGGAAATTCTGCTCTTGACATTACCATTATAGCCGAGGTTGAGGAACACAAAACAACAGTGAAGGAACTTGTGAAAAAGCTTCGCTCGGCTTTGTTGAAGAAGACCTCCCACAACCAAAAATGA 993 0.429 MNSSIYEEDFLRQILHQPSFPSMTDTTHSPLIETNTFTTTDVGGAAAASSLSLNDSGACQSKRNSPSPIISGLASFSDKPATSSSSTQSTYILSFDNSTLIPGNTRASLKRTPENNNNSESKANQRTRKSRSSSDSLNHIMSERKRRQELTEKFIALSATIPGLKKIDKSSVLSEAINHMKKLKERVRELEEENKKISGELLLSMSGLKKSSLLNSSSEDHHQDTISSETVSFDDCFRMNEALPEVEARVLHNQVLIRIHCEKQKCVLLNILAYLRSLHFSITSTSVLTFGNSALDITIIAEVEEHKTTVKELVKKLRSALLKKTSHNQK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4832g00017 330 Coils Coil 173 200 - -
Pral4832g00017 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 202 IPR036638 GO:0046983
Pral4832g00017 330 SMART finulus 140 189 IPR011598 GO:0046983
Pral4832g00017 330 MobiDBLite consensus disorder prediction 124 139 - -
Pral4832g00017 330 Gene3D - 117 199 IPR036638 GO:0046983
Pral4832g00017 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Pral4832g00017 330 MobiDBLite consensus disorder prediction 102 123 - -
Pral4832g00017 330 MobiDBLite consensus disorder prediction 102 139 - -
Pral4832g00017 330 PANTHER BHLH TRANSCRIPTION FACTOR 19 324 - -
Pral4832g00017 330 Pfam Helix-loop-helix DNA-binding domain 138 183 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4832g00017 Pral-Chr4832 113910 116878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4832g00017 13 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.462 6.17e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4832g00017 HLH 1.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4832g00017 - - pcin:129289282 309.301