Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4832g00013 ATGAGTAATTTTATTGCTATATTCCTGCTCATTTGGGTATCAGGCTTTTCTCCTTCAGTTTCTCGTTTTTTTGCAAATGCTGAAGCTGAATCTCCAGAATTAGACAATAGAAAGCTGCTCACTTTCAGAGGCTCTCCTTCCCGCCTGTTGATATTATTGTCAAGTATTGCGGACGTTAGAGTAGGGCACCACCAGAATTTGGACAAGAGAATTCTAATAGCACTTATTGTTTGTTCTGCTCTTCTTGTCTCAATCTTCCTATTTTTAACATATATCTGGTGTCATCGACGCAAAATTTTCAAAGTTCCCAGTTCTAAAAGCCCTGAGACCATCGAAGCTGCAAATGGGGTGTCACTTAGCCCTGTTGATGTTAAATTTAGTTACTCAAAAATGGCAGAAAAGAAGAGTGCAATTGCTATATTTGACTTTCAGTTGTTAGAGGTTGCAACAAACAGCTTTGCCAAAAGTAATATTCTGAGTGAGAGTGGATCTAGGCTAGTGTACAGAGCTTGCTTTGATGAGCATCTCAAGGCAGCTGTGAAGAAAGCAGATAGCAGTGCTGATAGAGAATTTGAGAATGAAGTGAATTGGTTAAGCAAGATTCGGCATCAGAATATCATTAAACTTCTTGGTTACTGTATTCATGGTGAATCAAGGTTTCTTGTATATGAAATGATGGAGAATGGATCTTTGGAAACTCAATTACATGGACCTGATCGTGGATCATCTTTAAATTGGTACCTCCGGTTAAAGATTGCCATTCATGTTGCCAGGGCATTAGAACATCTTCATGAGCACTCTAATCCTCCCGTGGTTCATAGAGACCTAAAATCTTCTAATGTTCTCCTGGATTCTCACTTTAATGCCAAGGTCAGCAATTTTGGGCTTGCTGTAAGTTCTGGAATGCAAGACAAGAACATACAGATGTCAGGAACTCTGGGTTATGTAGCACCTGAGTACATATCACATGGTAAGCTAACTGATAAGAGTGATGTATATGCTTTTGGGGTTGTCCTTCTAGAGCTTCTAACGGGAAGAAAAGCCGTGGACAAGATGTCCTCAGACCAATACCAATCCATTGTCACATGGGCCATGCCTCAGATAACTGACAGATCAAAGATTCCAAGTATTATAGATCCTGTAATCAGAAACACCATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTACTTTGTGTACAAACAGAACCAAGTTATCGGCCGCTAATAACTGATGTCCTGCACTCTCTCATCCCTTTGGTACCCACGGAGCTGGGAGGATCACTCAGAGTTTCAGAATCAGTTTGCTCCGAGAATTTGCATTGA 1332 0.4062 MSNFIAIFLLIWVSGFSPSVSRFFANAEAESPELDNRKLLTFRGSPSRLLILLSSIADVRVGHHQNLDKRILIALIVCSALLVSIFLFLTYIWCHRRKIFKVPSSKSPETIEAANGVSLSPVDVKFSYSKMAEKKSAIAIFDFQLLEVATNSFAKSNILSESGSRLVYRACFDEHLKAAVKKADSSADREFENEVNWLSKIRHQNIIKLLGYCIHGESRFLVYEMMENGSLETQLHGPDRGSSLNWYLRLKIAIHVARALEHLHEHSNPPVVHRDLKSSNVLLDSHFNAKVSNFGLAVSSGMQDKNIQMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKAVDKMSSDQYQSIVTWAMPQITDRSKIPSIIDPVIRNTMDLKHLYQVAAVAVLCVQTEPSYRPLITDVLHSLIPLVPTELGGSLRVSESVCSENLH 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4832g00013 443 SMART serkin_6 153 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4832g00013 443 ProSiteProfiles Protein kinase domain profile. 153 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4832g00013 443 FunFam probable receptor-like protein kinase At1g80640 226 424 - -
Pral4832g00013 443 SUPERFAMILY Protein kinase-like (PK-like) 132 419 IPR011009 -
Pral4832g00013 443 Gene3D Transferase(Phosphotransferase) domain 1 226 426 - -
Pral4832g00013 443 PANTHER OS01G0750732 PROTEIN 41 424 - -
Pral4832g00013 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Pral4832g00013 443 Pfam Protein tyrosine and serine/threonine kinase 174 414 IPR001245 GO:0004672|GO:0006468
Pral4832g00013 443 Gene3D Phosphorylase Kinase; domain 1 119 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4832g00013 Pral-Chr4832 101272 105025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4832g00013 59 365 Receptor kinase-like Gene Family AT1G80640 48.875 9.02e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pral4832g00013 PK_Tyr_Ser-Thr 9.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4832g00013 - - gmx:100811188 611.683