Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4832g00001 ATGGAGGTTCCATGGCAGAATTGGTTCTCGGATCTGGATATGGATGAGACCAATTTCTTCAATAATCAATGGCACAAGCCTTATAACTCTTTTGATGATGAGGATGATGAGTTTCTTAAGGAGATCTTTCACCAACCTTCTTTCTCTTCCGAGAGTGACAGTACTCACTCTTCCTCTATTCAAAACACCGCCGTCACTGCCGCATCAGATGGTGGTGGTGGTGGTGGTGCCGCTGCCGCCGCTGTTACAACACCCATCGTTAGCAGCTTATCGTTGGACAACGATTCCGGCGCCGGCCAGCTGAAGCGGCCTAACAACTCGAGCTCAACCCTCTCGAAACTTGGTAGCTTCTCGGACAAACCAGTAGCCTCATCGGCCCCGTCAACTTATATTCTGTCCTTCGATAACTCAACAGTTCTCCCGGCCACCTCCGACGGTGGTCACCGGAAACACGAATCGGCGATCAAGAGTCGTAATCAAGAGAAATTAGAGAGTAGTATTACAGGTGGTGGAGGAGGAGGAGGAGGGGGAGGAGGCACGCGCGCTTCCCAAAAACGAACCCTAGAAAACCAAAATAGTGATCAGCCAAGAGCTAATCAAGGGACAAAGAAGACTAGAAGTTCATCCGAGACACTGGATCACATAATGGCTGAGAGAAAAAGGAGACAAGAACTCACTGAGAAGTTCATTGCACTCTCAGCGACAATCCCTGGTTTGAAGAAGATTGACAAGGCTTCAATACTAAGCGAAGCCATAATTCACGTGAAGCAACTTCAAGAGAGAGTGAAAGAGTTAGAAGAACAGAACAAGAAGATGAGTAGCTTGGAGTCCTCAGTGTCAAGGTACATGATGAAGAATAAGAAGACATCGTCGTCGTCGTCGAGCCAGCTCTATAATAATTATAATAATAATGCTGAAGACATTCAAGAGACAACCTCCTGTGAAATGAGCTCCGATAATTACTTCAGAATTTGTGAAACCCTTCCTGAAGTTGAAGCAAGAGTTTTACACAGACAAGTCCTCATCAGAATCCACTGTGAGAATAAAAAAGGCGTCACCCTTAACTTGTTGGCTCAGCTCCACAATCTTCATTTCTCCATAATCAGTCACAGTGTGTTGCCGTTTGGAAATTCCACTCTTGATATTACCATTATTGCTGAGGTCGATGAGGAACGCAGCATTCCAGTGAAGGAACTTGTGAAAAAGCTGAGAAAGACACTGTTGAAGACAGTTGAGTGA 1239 0.4568 MEVPWQNWFSDLDMDETNFFNNQWHKPYNSFDDEDDEFLKEIFHQPSFSSESDSTHSSSIQNTAVTAASDGGGGGGAAAAAVTTPIVSSLSLDNDSGAGQLKRPNNSSSTLSKLGSFSDKPVASSAPSTYILSFDNSTVLPATSDGGHRKHESAIKSRNQEKLESSITGGGGGGGGGGGTRASQKRTLENQNSDQPRANQGTKKTRSSSETLDHIMAERKRRQELTEKFIALSATIPGLKKIDKASILSEAIIHVKQLQERVKELEEQNKKMSSLESSVSRYMMKNKKTSSSSSSQLYNNYNNNAEDIQETTSCEMSSDNYFRICETLPEVEARVLHRQVLIRIHCENKKGVTLNLLAQLHNLHFSIISHSVLPFGNSTLDITIIAEVDEERSIPVKELVKKLRKTLLKTVE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4832g00001 412 Gene3D - 208 282 IPR036638 GO:0046983
Pral4832g00001 412 SMART finulus 215 264 IPR011598 GO:0046983
Pral4832g00001 412 Coils Coil 248 285 - -
Pral4832g00001 412 Pfam Helix-loop-helix DNA-binding domain 214 259 IPR011598 GO:0046983
Pral4832g00001 412 MobiDBLite consensus disorder prediction 94 122 - -
Pral4832g00001 412 MobiDBLite consensus disorder prediction 183 206 - -
Pral4832g00001 412 MobiDBLite consensus disorder prediction 145 159 - -
Pral4832g00001 412 PANTHER BHLH TRANSCRIPTION FACTOR 42 409 - -
Pral4832g00001 412 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 212 273 IPR036638 GO:0046983
Pral4832g00001 412 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 209 258 IPR011598 GO:0046983
Pral4832g00001 412 MobiDBLite consensus disorder prediction 142 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4832g00001 Pral-Chr4832 7098 10240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4832g00001 213 407 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 42.564 5.82e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4832g00001 HLH 3.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4832g00001 - - pcin:129289587 514.612