Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4831g00022 ATGGATGATGCTGAAGACTTCCAGGACCTGTTCTGTCACATGATGATGTCTTTTGATGAGGAAGACGAAGAGTTCCTCAGAAACATTCTTCAGCAGCAGCCACCTGGTACTGGAAATAATAATGATGATAATAACAACTATCATTTGTCTTCTTCTCAAAGTGAAGATAAATCCTTTCCCACCGTCGATTTCTCTAACGACAGCTCCGGCAACCGTGGTGGTTCGAATGATAACAAAAACCGCGTGATGTCTGCTAAAGCATACATTTTATCGTTTGATCAATCCAACGTAATACCGGCAGAAGAAGCAATCTCAAAGCACGAAGAATATGGTACCTCGGAACTTGGTTCATTAAAAAGGATGAGAGAAACACGTAATGTTGAGCCCAGAAAGAAGGCTAGAAACTGTTCAGAGACTGCGAATCATATAATGGCGGAGAGGAGGAGAAGGCAGCAACTCACAGAGAGATTTATTGCACCTTCGGCAGCTATTCCTGGCTTGAAGAAGATGGACAAAGCCACAATTCTTCAAGAAGCCACCAAATACGTGAAGCAGTTTCGAGAGAGAATAACAGAACTAGAGAAACAAAATAGCTTCAACGCATCAGAGTCATCGATGAGATAG 624 0.4231 MDDAEDFQDLFCHMMMSFDEEDEEFLRNILQQQPPGTGNNNDDNNNYHLSSSQSEDKSFPTVDFSNDSSGNRGGSNDNKNRVMSAKAYILSFDQSNVIPAEEAISKHEEYGTSELGSLKRMRETRNVEPRKKARNCSETANHIMAERRRRQQLTERFIAPSAAIPGLKKMDKATILQEATKYVKQFRERITELEKQNSFNASESSMR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4831g00022 207 Gene3D - 136 206 IPR036638 GO:0046983
Pral4831g00022 207 PANTHER BHLH TRANSCRIPTION FACTOR 15 204 - -
Pral4831g00022 207 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Pral4831g00022 207 Coils Coil 176 196 - -
Pral4831g00022 207 MobiDBLite consensus disorder prediction 30 79 - -
Pral4831g00022 207 MobiDBLite consensus disorder prediction 29 79 - -
Pral4831g00022 207 Pfam Helix-loop-helix DNA-binding domain 140 185 IPR011598 GO:0046983
Pral4831g00022 207 SMART finulus 143 192 IPR011598 GO:0046983
Pral4831g00022 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 200 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4831g00022 Pral-Chr4831 260669 261590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4831g00022 109 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.748 8.25e-20 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4831g00022 HLH 1.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4831g00022 - - pcin:129287632 266.544