LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4831g00001	ATGGGTGCTACTCTGTTATCGGAGCTTGCGACAGAGATAGCGATCCCGGTTTGTGCTATTGTCGGGATCGTTTTCTCTTTGGTGCAGTGGTTCCTTGTTTCGCGTGTGAAGCTCACACCTGAGCGTCACGGGCCGTCGTCGTCTCCGAGTAACAAGAATGGGTACGGAGACTACCTGATTGAAGAAGAGGAGGGTATCAATGACCACAATGTCGTCGTGAAATGTGCCGATATTCAGAGTGCCATCTCTGAAGGTGCAACATCCTTTCTATTTACTGAATACCAATATGTGGGAATCTTCATGGCTGCTTTTGCAATTCTAATCTTCCTCTTCCTGGGATCTGTGGAGGGCTTCAGCACCAAGAGCCAGCCCTGCACATATGATAAGGAGAGGATATGCAAGCCAGCACTTGCGACTGCAATCTTCAGCACCGTGTCCTTCTTGCTTGGTGCTTTCACTTCAGTCCTTTCGGGTTATCTTGGGATGAAAATAGCCACCTTCGCCAATGCAAGGACAACATTGGAAGCAAGAAAGGGAGTTGGTAAAGCTTTTATTGCTGCATTTAGGTCTGGTGCAGTGATGGGTTTCCTTCTTGCGGCAAATGGTCTTTTGGTGCTCTACATAGCTATAAATCTTTTCAAGCTGTATTATGGTGATGATTGGGAAGGCCTTTTTGAGGCTATTACTGGTTATGGTTTGGGTGGATCTTCCATGGCTCTGTTTGGGAGAGTTGGTGGAGGTATCTATACCAAAGCTGCTGATGTTGGTGCTGATCTAGTCGGAAAAGTTGAGCGAAATATTCCTGAGGATGACCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGACAATGTTGGAGATATAGCGGGAATGGGTTCTGATCTGTTTGGCTCATATGCAGAATCATCCTGTGCTGCTCTGGTTGTTGCTTCCATATCTTCCTTTGGAGTCAACCACGAGCTCACAGCAATGTTATATCCCTTGCTTATCATTTCTATGGGCATTCTCGTCTGTTTGCTCACTACTCTCTTTGCTACCGACTTTTTTGAGATTAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTTATCATCTCCACAGTTCTTATGACCATTGGAATTGCAATTGTTTCCTGGATTGCTCTGCCATCATCCTTCACAATTTTTAACTTTGGGGCTCAAAAAGTGGTGAAGAACTGGCAGCTGTTCCTCTGTGTGGGGGTTGGTCTCTGGGCTGGACTTATTATTGGATTTGTGACCGAGTATTATACTAGCAACGCTTACAGCCCTGTACAAGATGTAGCTGATTCTTGCCGGACTGGAGCTGCAACTAATGTTATCTTTGGCCTTGCTCTGGGATACAAATCTGTTATCATTCCTATTTTTGCCATTGCAGTCAGCATTTTTGTTAGTTTTAGTTTTGCTGCCATGTATGGTATTGCTGTGGCTGCCCTTGGAATGCTGAGCACCATTGCTACTGGGTTGGCTATTGATGCATATGGGCCCATCAGTGACAATGCTGGAGGAATTGCAGAGATGGCGGGTATGAGCCACCGCATCCGTGAGAGAACTGATGCCCTTGATGCTGCTGGAAACACAACTGCTGCCATTGGAAAGGGCTTTGCCATTGGATCTGCTGCTCTAGTGTCGTTGGCTCTCTTTGGTGCATTTGTGAGCCGAGCTGCAATCTCAACTGTAGATGTCTTGACCCCTAAGGTCTTCATTGGACTTCTAGTTGGTGCCATGCTTCCCTACTGGTTCTCTGCCATGACCATGAAGAGTGTAGGAAGTGCTGCCTTGAAGATGGTAGAGGAGGTTCGCAGGCAATTCAACACCATTCCTGGCATCATTGAGGGCCATTCCAAGCCTGATTATGCTACCTGTGTCAAAATCTCGACCGATGCATCCATCAAAGAGATGATTCCTCCTGGTGCCCTTGTCATGCTCACCCCACTCATTGTTGGTACATTTTTCGGTGTTGAAACTCTCTCAGGTGTTCTTGCTGGCTCTCTAGTTTCTGGTGTTCAGATCGCAATATCAGCGTCCAACACCGGTGGTGCTTGGGATAATGCTAAGAAGTACATCGAGGCTGGTGCATCTGAGCACGCTAGGACCTTGGGACCTAAGGGATCTGATCCACACAAAGCAGCTGTGATTGGTGACACTATTGGAGACCCTCTCAAGGACACATCCGGCCCGTCTCTCAACATCCTGATTAAGCTCATGGCGGTGGAGTCACTTGTGTTTGCTCCATTTTTCGCCACTCATGGTGGTTTACTTTTTAAGATCTTTTAA	2304	0.4688	MGATLLSELATEIAIPVCAIVGIVFSLVQWFLVSRVKLTPERHGPSSSPSNKNGYGDYLIEEEEGINDHNVVVKCADIQSAISEGATSFLFTEYQYVGIFMAAFAILIFLFLGSVEGFSTKSQPCTYDKERICKPALATAIFSTVSFLLGAFTSVLSGYLGMKIATFANARTTLEARKGVGKAFIAAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHELTAMLYPLLIISMGILVCLLTTLFATDFFEIKAVKEIEPALKKQLIISTVLMTIGIAIVSWIALPSSFTIFNFGAQKVVKNWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGIIEGHSKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF	767

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4831g00001	767	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	6	757	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pral4831g00001	767	PIRSF	H+-PPtase	8	765	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pral4831g00001	767	Pfam	Inorganic H+ pyrophosphatase	58	752	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pral4831g00001	767	NCBIfam	V-type H(+)-translocating pyrophosphatase	10	762	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pral4831g00001	767	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	9	757	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4831g00001	Pral-Chr4831	35094	39877	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4831g00001	5	630	Primary Pumps ATPases	AT1G15690	87.420	0.0	1116

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4831g00001	K23025		-	qsa:O6P43_017992	1423.3