Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4829g00010 ATGGGTATGGCTTTTTGCTCAATATTTTTCGGTGCAAAGCGTTCAGAACGAAAAGCACGAGGTAAGAAAGTGCCTGCATGGAGAGTCTTTTCTCTGAAGGAACTACACTCAGCAACAAACAATTTTAACTACGATAACAAGCTTGGAGAAGGGGGATTTGGCATTGTATACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTAAAAGCCTGGAGCAACAAAGCAGATATGGAATTTGCTGCCGAAGTTGAGATATTGGCCAGAGTAAGACACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGGCAAGAAAGACTAATTGTGTACGATTATATGCCAAATTTGAGCCTACTCTCCCATCTTCATAGACAGCACTCTCCAGATTGCCTTCTTAATTGGGACAGGCGCATGAATATCGCTATTGGGTCGGCCGAGGGAATTGCATATCTTCACCACCAAGCAACACCCCACATAATCCACAGGGACATCAAATCAAGCAATGTGTTGTTGGATGCAGATTTCCAAGCTCGGGTTGCTGGTTTTGGTTTCGCAAAGCTGATTCCTGATGGGGCAGCCCATGTGACGACAAGAGTTAAGGGAACCCTTGGCTACCTCGCGCCAGAATATGCCGTGCTCGGTAAGGCATCTGAGAGTTGTGATGTCTACAGTTTTGGGATTCTCCTGCTAGAACTTGCCAGTGGCAAGAAACCAATTGAAATACGAAGTACTTCAATGAAGCGATCGATAGCTGATTGGGCACTACCATTGGTTATTGAGAGGAGATATAGTGACCTTGCAGATTCAAAGCTAAAGGGTAATTATGTTGAGGAAGAACTAAAAAGGATGATTCTTGTGGCACTTGTCTGTGCTCAAAGACAGCCTGAGAAGAGACCCACCATGCTTGAGGTGGTAGATCTGCTAAAAGGAGAATATAAGGATAAGTTATCTGATTTAGAAAAGAATGAATTGTTCAGAAACCCTCCAGATTTAGAAGACAATGATGGGGCATCAGTTGCTGAAGATAGTTCAGACTTCATCTCAGAAGTGAAGGAATCAACATTTGAGATGAAAGAGAGTAGTGGGCTATAG 1107 0.4354 MGMAFCSIFFGAKRSERKARGKKVPAWRVFSLKELHSATNNFNYDNKLGEGGFGIVYWGQLWDGSQIAVKRLKAWSNKADMEFAAEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHRQHSPDCLLNWDRRMNIAIGSAEGIAYLHHQATPHIIHRDIKSSNVLLDADFQARVAGFGFAKLIPDGAAHVTTRVKGTLGYLAPEYAVLGKASESCDVYSFGILLLELASGKKPIEIRSTSMKRSIADWALPLVIERRYSDLADSKLKGNYVEEELKRMILVALVCAQRQPEKRPTMLEVVDLLKGEYKDKLSDLEKNELFRNPPDLEDNDGASVAEDSSDFISEVKESTFEMKESSGL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4829g00010 368 Gene3D Phosphorylase Kinase; domain 1 12 117 - -
Pral4829g00010 368 PANTHER OS01G0253100 PROTEIN 23 318 - -
Pral4829g00010 368 CDD STKc_IRAK 48 315 - -
Pral4829g00010 368 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Pral4829g00010 368 Pfam Protein kinase domain 43 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4829g00010 368 ProSiteProfiles Protein kinase domain profile. 42 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4829g00010 368 SMART serkin_6 42 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4829g00010 368 MobiDBLite consensus disorder prediction 328 348 - -
Pral4829g00010 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 118 329 - -
Pral4829g00010 368 SUPERFAMILY Protein kinase-like (PK-like) 24 313 IPR011009 -
Pral4829g00010 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Pral4829g00010 368 Gene3D Transferase(Phosphotransferase) domain 1 118 331 - -
Pral4829g00010 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 14 117 - -
Pral4829g00010 368 PIRSF ILK 8 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4829g00010 Pral-Chr4829 168715 171123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4829g00010 30 316 Trihelix Transcription Factor Family AT1G70460 50.859 3.30e-92 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pral4829g00010 Pkinase 5.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4829g00010 - - cave:132188407 588.186