Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4829g00006 ATGGAATTTTACAGAGGCCTTGATATCACCACCAATAAGATCCCTATTGACGAGCGCAAAGGCGTCCCTCATCATCTTCTCGGCGATGTCAACCCACAAAATGGAGAGTTTATGCCTTTAGATTTTTTCTTGCGTGTTGGCTCTGTCATCTCCGACAATACTTCCAGGAGGAAGATTCCCATTGTTGTTGGTGGGTCTAACTCATTCGTTCATGCTCTACTTGCGGACCGATTCGACCCCCAGATAAATGTATTTGATTGGTCGTTGCCATCGAGTTTGATCTCATCGGAGTTGAGATATGAGTGTTGCTTCTTGTGGGTGGACGTGTCATTTCCTCTATTGTCAGATTACTTGATGAAGCGGGTCGATAATGCTCGACATGGGAATGATGGAAGTTAA 399 0.4486 MEFYRGLDITTNKIPIDERKGVPHHLLGDVNPQNGEFMPLDFFLRVGSVISDNTSRRKIPIVVGGSNSFVHALLADRFDPQINVFDWSLPSSLISSELRYECCFLWVDVSFPLLSDYLMKRVDNARHGNDGS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4829g00006 132 Pfam IPP transferase 3 81 - -
Pral4829g00006 132 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 124 IPR039657 -
Pral4829g00006 132 Gene3D - 1 110 IPR027417 -
Pral4829g00006 132 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 111 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4829g00006 Pral-Chr4829 104666 105064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4829g00006 1 75 C2H2 Transcription Factor Family AT2G27760 44.000 5.98e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4829g00006 K10760 - qsa:O6P43_032737 187.578