Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4826g00012 ATGAGGGAATCGCGAAGCACAGAATTTTTAGCGGTTGATTTTGAATTTCCAACCAAAAGCCCCGCCACCACTGAAATACAGAGATCTCGCTTTCTTCATTCAAGTCTCCGTTTCCTTCTTCTCATTTTCTTCTTCCGAATTTTCCTTTTCAAGTTTTCAATTGCCGCCATAGACTCACTGCATCAGGGCCAAGCAGTACCAATCTGTCATCCAGTTTTGATCGGTTATTTTTATGCGCACAATCTACTCGGTCAATTCTCGCTATCACTGAAGCTATTTGCAAAAGGTTGTTTCTTTCGAAATTGCAAAATGTACGGGAGAAAAGCCTGCCAACTTGTTAAAGAGCTAGCAAGTGGGGAGAAAGGCCAGTTGACGCCATTCAATAGCGATCTATTTGAACAAGTAGTTGCAGAATGCAGTCAACATCACCTTGAGCTTCAGTCCTTGATAAGAAAGATGCAGGAAGAAGGGTTGGATGTCCAAACTACTAGAAATGCTGAACACCATGGAGCCCTTATCCACCATCTTTCTTTAGTTCGCAATAAACGCTGCCTAATGGCCTATGTTTACAACCGAGCAGAGGCAATACAGAGTTTGTTATGGAAAATTGGACACGTACTTCCTCAAGAAATTGAGGAGAAACTTTGTCATGCGGAGGCGGAGTATTTTAAGAAGCATTCCGCGGCTTTGAAATCATATATGTCAAAAGTGCAACTTGATCTGACTGTGGATATGGTGCCGCCCAAAGATCCTTACATCCAAGTGAGGGTCCTCGATGATATTGGTGATGGGATTGTGCTTAGCGATGACAAGACTGCCAATTTTGCCCGCCATTCAATGCATTTTCTGAAGCGAACTGACGCGGAGCAATTTATCTCACGGGGTTTAATGGAGGAGCTCACAGGCTGA 909 0.4356 MRESRSTEFLAVDFEFPTKSPATTEIQRSRFLHSSLRFLLLIFFFRIFLFKFSIAAIDSLHQGQAVPICHPVLIGYFYAHNLLGQFSLSLKLFAKGCFFRNCKMYGRKACQLVKELASGEKGQLTPFNSDLFEQVVAECSQHHLELQSLIRKMQEEGLDVQTTRNAEHHGALIHHLSLVRNKRCLMAYVYNRAEAIQSLLWKIGHVLPQEIEEKLCHAEAEYFKKHSAALKSYMSKVQLDLTVDMVPPKDPYIQVRVLDDIGDGIVLSDDKTANFARHSMHFLKRTDAEQFISRGLMEELTG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4826g00012 302 Gene3D - 104 237 - -
Pral4826g00012 302 Pfam GINS complex protein 148 219 IPR021151 -
Pral4826g00012 302 CDD GINS_B_Psf1 251 300 - -
Pral4826g00012 302 FunFam DNA replication complex GINS protein PSF1 104 237 - -
Pral4826g00012 302 PANTHER PARTNER OF SLD5 104 301 IPR005339 GO:0000811|GO:0006260
Pral4826g00012 302 SUPERFAMILY GINS helical bundle-like 104 249 IPR036224 -
Pral4826g00012 302 CDD GINS_A_psf1 106 239 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4826g00012 Pral-Chr4826 63514 67408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4826g00012 104 302 Core DNA Replication Machinery Family AT1G80190 70.297 2.19e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4826g00012 K10732 - qsa:O6P43_027860 356.681