Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4820g00119 ATGGGTTGTTGTGCTTATCCTCGTTCTACTCGGATCCTTCCTCGTTCTGATGACGATGAAACCAAGAGAGACATAAAGATGATTAAGAGAACCATAAGCATGTCCGATGTGCTTGGAAATTTCACCAGTCATACGAGCAGTGGAAATGGCGATCATCAATATGGCTGTCTTACACGTGGCAGCAATATGAATAGCCTGCCAAAGCTTCAGTTCAGAGATCACATATGGACTTATACTCAGAGATACCTTGCAGCTGAAGCTTTTGAAGAGGCAGCACAGGAGATGATCGATTCTGATCAAGCCGAGGAAGATGGATGTGCTGACGGAATGAGACTTGTTCAACTTCTAATTGCTTGCGCGGAAGCTGTGGCTTGCCGTGACAAATCGCATGCTTCTAATTTATTATCTGAGCTTAAAGCCAATGCTTTAGTGTTCGGTTCTTCTTTCCAAAGGGTTGCTTCTTGTTTCGTCCAAGGCCTGGCGGATCGTCTTGCCTGGATTCAACCTATTGGGGCTGTGGGATCTATAGTGCCTATAATGAACATTATGGATACAGCTTCTGAAGAAATGAAAGAAGCTTATAAATTAGTGTATGAGATTTGCCCGCATATTCAGTTTGGTCACTTTGTAGCTAACTCCACAATATCGGAAGCCTTTGAGGGTCAGAGTTTTCTTCATGTGGTGGACTTAGGGATGAGCCTTGGTCTCCCCCACGGGCACCAATGGCGAGGACTGATCCAGGATCTTGCTAACCGCGCCGGGAACCCTGTTCGCCGGCTTCGAATTACTGGCGTTGGACTTTGTATTGAGAGACTCCAGAACATAGGTGAAGAACTCGAGGCTTATGCAAAAAACTTGGGGATCAATCTGGAATTCTCAGCAGTGCAAAAAAACTTGGAAAATTTGCGTCCTGATGATATACAAGTCCATGAGGGTGAAGTTCTAGTTATAAACAGCATTCTTCAGTTGCATAGTGTGGTGAAAGAAACTCGTGGATCTTTGAACTCAGTGCTTCAGATGATCCATAAGCTCTCACCAAAAGTGTTTGTTATGGTCGAGCAGGATTCAAGCCACAATGGACCCTTCTTTCTCGGGAGATTCATGGAATCGCTGCATTATTACTCTGCAATATTTGACTCGCTTGATGCTATGTTGCCCAAGTATGACACAAAGAGGGCCAAAATAGAACAGTTTTATTTCGCAGAGGAGATAAAGAACATAGTGAGCTATGAGGGAGCAGCGAGGGTGGAGAGGCACGAGAGACTGGACCAGTGGCGGCGGAGGATGAGCCGGGCCGGGTTTCAGGCGGCACCGATCAAGACGGTGGCTCAGGCCAAGCAGTGGCTTCACAAGAAAGAGGTCAGCGATGGATATACCGTTGTGGAAGAGAAAGGATGCTTGGTGCTTGGATGGAAATCAAAGCCAATTGTTGCTGCTTCTTGCTGGAAATGCTAA 1455 0.4612 MGCCAYPRSTRILPRSDDDETKRDIKMIKRTISMSDVLGNFTSHTSSGNGDHQYGCLTRGSNMNSLPKLQFRDHIWTYTQRYLAAEAFEEAAQEMIDSDQAEEDGCADGMRLVQLLIACAEAVACRDKSHASNLLSELKANALVFGSSFQRVASCFVQGLADRLAWIQPIGAVGSIVPIMNIMDTASEEMKEAYKLVYEICPHIQFGHFVANSTISEAFEGQSFLHVVDLGMSLGLPHGHQWRGLIQDLANRAGNPVRRLRITGVGLCIERLQNIGEELEAYAKNLGINLEFSAVQKNLENLRPDDIQVHEGEVLVINSILQLHSVVKETRGSLNSVLQMIHKLSPKVFVMVEQDSSHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSYEGAARVERHERLDQWRRRMSRAGFQAAPIKTVAQAKQWLHKKEVSDGYTVVEEKGCLVLGWKSKPIVAASCWKC 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4820g00119 484 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 92 478 IPR005202 -
Pral4820g00119 484 ProSiteProfiles GRAS family profile. 103 483 IPR005202 -
Pral4820g00119 484 Pfam GRAS domain family 112 483 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4820g00119 Pral-Chr4820 602497 604034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4820g00119 104 484 GRAS Transcription Factor Family AT1G66350 36.883 3.49e-78 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4820g00119 GRAS 7.6e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4820g00119 - - tcc:18605049 692.189