Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4820g00114 ATGGAGTGCAACAAGGATGAGGCTCTAAGGGCTAAGGAAATTGCAGAAAGTAGAATGCAAAGTGGTGACTTTGTAGGGGCACTGAAGTTTGCTACAAGGGCCCAAAAACTGTTTCCTGAAATTGAGAACATCGTTCATATCCTTACAGTTTGTGAGGTTCACTGTGCTGCACAGAAGAAGCTTTCCGGATCTGAAATGGATTGGTATGGAATTCTTCAGACTGAACAACTGGCAGATGAAGCAACCATAAAGAAACAGTTCAGGAAGCTTGCCCTGCTACTTCATCCTGATAAAAATAAGTTTTCAGGTGCAGAGGCTGCATTCAAGTTGATTGGAGAAGCAAATAGGTTGTTAACTGACCCAGAAAAGCGGAGATTGTATGACATGAAGTACAGAGTCTTCATGAGAACTGCATCATCTAAGCCCCCATATTATCATTCAAATGGGAGTGTATTTGCCCAGAAACACGATGTACAAGCAAGAAATCATCACAATTATTCACACTCCACAAGTTGGAATTCCTATCAGCAGGCTGCTCAACAAACTTTCTGGACATCTTGTAATCATTGTAAAACCAGGTATGAATACTACAGAACTGTTTTAAATGCAACCTTACGCTGTCACCAGTGTTCTAGACCTTTTGTGGCTCATGAGTTGGGATTTCAGCCCGGTTCACCTGGATATAAGTGGACAACAGACCAAAGAGAATATCCAAATTTTGAATCCGTGACAAAATGCACTTATGGAGTTGATGGGCACTGTAAAGGTCAAAAGGGTGACAATGGCAATGTGGCTGCGGGAAGGGCAAAGGTGGATGTTAGAAGGTCCAAACCTGCTTCACCCAAACCCAGGGAGTCTTGTTCCTCAACTCATGTTGGAAGTAAGAGGAATAGGGAGTCAGTTCCAGATCCCAGAGAAAGTTGCAAGACTGGGAATGCTAACAGTGTTAAAAATTCCAATGTTCAAGGAAGTGGTGTTGACCCTTCTGGATCTAAAGCAGAAGCACAGTCTAGGAGATCTTCCAGGCAAAAGAAGGATGTTTCTTACTCTGAAACCTCCCATGATGATGATGATTTTGAGAGTCCTTCTAAAAGGCGCCGACAAAATGGATCATCTAGCACTGTAGCAATGGAGGAAAGAGAAGTACCTGCAAGTGGTGGGTTGTCTAAACACAATCATTCAGCTAGTTCTGTAGCTGGCCTGGGTAGTGAGAGTGGAGAGAAGAACAATAAAGCAAGTGGTCTGCCTGAAGAAATATTGCTACAGAAGAGAAGCAAAATTGAGCAATCTCATGTGCATGGAGAGGAGCCATCCAAGTCAAGTGTTGATGAGACAAACTCAAAAGCCGATCATCATCCTCCATTTAATTCAGATGTCCCTTCTATTCCAGATATCATCAACTGTCCTGACCCAGATTTCAGTGATTTTGAGAAGGATAGGGCAGATAATTGTTTTGTTAAAGATCAGTTCTGGGCCATTTATGATCCAAGTGATAGCATGCCAAGATACTATGCTCGTGTGAAGAAAGTGCTGTCTCCTGGGTTCAAGTTGCTGATTACCTGGCTGGAGGCTGACCCAGATGATGAAGGTGAGATTGATTGGCAAAATGCCGAGTTGCCTGTTGGTTGTGGTAAGTTCAGATTAGGTGACACTCAAGAAATTGAAGACCGTGCTATGTTCTCTCATCAGATGCATAATATAAAAGCAATTGGCAGAAGACGTTATATGGTATATCCTAGTAAAGGGGAAACATGGGCAATATTTAAAGACTGGGATATAAAATGGAGTTCTAATCCAGAAAAGCATTGCAAGTACGAATATGAATATGTGGAGGTCCTGTCAGATTTTACTGAGAATATTGGCATTGAAGTTGTGTATCTTGGCAAATTGGAAGGCTTTGTTAGTCTCTTTCAGCAAACTGAGCGTAATGGACTTGGCTTATTTTTTGTTCCACCTAATGAGCTCTATAGGTTCTCACATCGAGTTCCTTCATTTAAAATGGCTGGTGATGAAAGAGATGGCGTTCGTTGTGGATCTTTTGAACTTGATCCTGCTGGTTTGCCTGTTGATCTTTTTGGGTTGGGTAATACCGATATGGATATGGGAGATGACGTGTTAGATGCCGGGGTCAAAAATTCAGGCCACAAATCCTCTGAACAAAAGGTGGAAAATGTGGTTCTTGATGAGAGTGGTCACGAGACGAAAATAAATAAGAGTAGTGATGTCGAAAGAGCTTCCTCAGTACTTAGAAGATCGCCAAGGGGGTTGAACAGAAAAGATATGAATAATGACCGAGTTAATAGAAGTCAGAATGTGGCTAGAGAGAATGGTAGCAAAGACATGGGCTGCATGGACTCCAGTCAACCTGATGGAACTGATGAGCCTAGTCATGAGAGGAAGCTGCATAAGACGGACGAGGTTCAAAAAGCTTCCTTGAAACTTAGAAGATCACCCAGGGGATTAAAAAACAGAAGTATGGAAAATGGTCAAGTAAATGAGAGTCAACATATGACGAGAGAGGATCGGAGCAAATATCTAGGTTGCAAGGACTTCCGTCAACCTGAGGGAATTTCTGTTGAAGATCAGGCTGGCGAGAGGGTCAAAACACTAAAGAAACATGCAAAAAATGATGGTGGAAGAGAAGGTTCAAATGTGCAGAGATCACCTAGAGATTTAAGCAAGAAAAAAGCCCAAGTAGATGCAAATCAATGTATGACTGGCAAGTTAAGTGGTGAGCATTCAGATGCCAACGAAAAGTTGAAGGATAGCAGATTTTCTGACTCTTTTGGAGGTGTTTGCAAACCTTCCACTGAAGGTTGCAGAGCTCCAAAAGCATCACGAAATATGATAAAATCTGAAGAGATGTTTCAGCGTGGTCAGATATGGGCATTATATGGTGACAAGGATCGGATGCCTGAGATTTATGCACAAATTAAGAAGATTGATTTTGCCCCGGATTTCAGATTGCATGTCGCCTCCCTTGAACCCTGTTCAATGCCCAAAGGCATAACTGGCGTGGTAGCTTGTGGTACCTTTATGGTTAAAAATGCTAAAACTCGGGTCGTTTCCATTTCTACTTTCTCTCATCAGTTAAGAGTTGAACCCAGGCAAGATAATAGATATGAAATTTATCCAAGGAAAGGTGAGATATGGGCGCTATACAAGAACCAGCATCGTGGATCAACTTGTTCAAACCAGGTTAGAGGTGATTGTCACATAGTGGAGGTGTTGGATGATGATGATGAGAGTTCAAAGGTTGTGTTTCTTGTTCGTCATCACGACTCTAGGCCAATTTACAAGACTCCTAGAATTCAGAGATCTAAAAATGTTATCATTAATATACCACGGGTGGATGCATATAGATTTTCTCACCGGATTCCTGCTTTTAAGCACACTGGGGATGGCGATACTCATCTCAAAGGATGTTGGGAGCTGGATCCTTCATCAGTTCCTGGTTTTGTAATAAACTTAGGGTGA 3477 0.4208 MECNKDEALRAKEIAESRMQSGDFVGALKFATRAQKLFPEIENIVHILTVCEVHCAAQKKLSGSEMDWYGILQTEQLADEATIKKQFRKLALLLHPDKNKFSGAEAAFKLIGEANRLLTDPEKRRLYDMKYRVFMRTASSKPPYYHSNGSVFAQKHDVQARNHHNYSHSTSWNSYQQAAQQTFWTSCNHCKTRYEYYRTVLNATLRCHQCSRPFVAHELGFQPGSPGYKWTTDQREYPNFESVTKCTYGVDGHCKGQKGDNGNVAAGRAKVDVRRSKPASPKPRESCSSTHVGSKRNRESVPDPRESCKTGNANSVKNSNVQGSGVDPSGSKAEAQSRRSSRQKKDVSYSETSHDDDDFESPSKRRRQNGSSSTVAMEEREVPASGGLSKHNHSASSVAGLGSESGEKNNKASGLPEEILLQKRSKIEQSHVHGEEPSKSSVDETNSKADHHPPFNSDVPSIPDIINCPDPDFSDFEKDRADNCFVKDQFWAIYDPSDSMPRYYARVKKVLSPGFKLLITWLEADPDDEGEIDWQNAELPVGCGKFRLGDTQEIEDRAMFSHQMHNIKAIGRRRYMVYPSKGETWAIFKDWDIKWSSNPEKHCKYEYEYVEVLSDFTENIGIEVVYLGKLEGFVSLFQQTERNGLGLFFVPPNELYRFSHRVPSFKMAGDERDGVRCGSFELDPAGLPVDLFGLGNTDMDMGDDVLDAGVKNSGHKSSEQKVENVVLDESGHETKINKSSDVERASSVLRRSPRGLNRKDMNNDRVNRSQNVARENGSKDMGCMDSSQPDGTDEPSHERKLHKTDEVQKASLKLRRSPRGLKNRSMENGQVNESQHMTREDRSKYLGCKDFRQPEGISVEDQAGERVKTLKKHAKNDGGREGSNVQRSPRDLSKKKAQVDANQCMTGKLSGEHSDANEKLKDSRFSDSFGGVCKPSTEGCRAPKASRNMIKSEEMFQRGQIWALYGDKDRMPEIYAQIKKIDFAPDFRLHVASLEPCSMPKGITGVVACGTFMVKNAKTRVVSISTFSHQLRVEPRQDNRYEIYPRKGEIWALYKNQHRGSTCSNQVRGDCHIVEVLDDDDESSKVVFLVRHHDSRPIYKTPRIQRSKNVIINIPRVDAYRFSHRIPAFKHTGDGDTHLKGCWELDPSSVPGFVINLG 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4820g00114 1158 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pral4820g00114 1158 Pfam Domain of unknown function (DUF3444) 951 1133 IPR024593 -
Pral4820g00114 1158 Pfam Domain of unknown function (DUF3444) 465 671 IPR024593 -
Pral4820g00114 1158 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 692 - -
Pral4820g00114 1158 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pral4820g00114 1158 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pral4820g00114 1158 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 427 463 - -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 289 305 - -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 791 813 - -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 766 785 - -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 834 880 - -
Pral4820g00114 1158 Pfam DnaJ domain 67 128 IPR001623 -
Pral4820g00114 1158 SUPERFAMILY Chaperone J-domain 63 132 IPR036869 -
Pral4820g00114 1158 SMART dnaj_3 66 123 IPR001623 -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 389 410 - -
Pral4820g00114 1158 CDD DnaJ 67 120 IPR001623 -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 257 412 - -
Pral4820g00114 1158 Gene3D DnaJ domain 52 143 IPR036869 -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 427 451 - -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 727 898 - -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 337 365 - -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 727 765 - -
Pral4820g00114 1158 MobiDBLite consensus disorder prediction 307 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4820g00114 Pral-Chr4820 564217 569327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4820g00114 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.174 1.39e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4820g00114 - - pcin:129320160 1583.54