Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4820g00104 ATGGCCGCCACCACCACCACCCCCACCAGTCTGGGCGATGGTGCCGATGATCGACTCCTAGCCACGGCTCAGCAGATCGTTAGGAGCCTCAACACTCCTAAGGAGGTCCGTGAAGACATGCTTTTGATCTTCTCTAGCTTCGATAATCGCCTGTCCAGTATCACCGATCTCATCAACGGTGAAGATTCCAAGCCTTCTGCGACTGAAGAAGACCTTGACCGCTTCCAAGCGGCTGAGAAAGTCATCCTTCGCTGGGACGGGTCCGGTTCTGGAGCACCTTCCCGCGAATCCAACTCGCTTCTCCATTCTCGGGGTGACGTTGTCGAGTATTTATGTGCGGTCGACGACATTATTCAGTGGATTGAACAAATTTCGATCGCTCCCTCCGGTAAAGAGACTCAAATCCTGATCGACCGGGCGGATAACGCGATCCAGCTCGCCATGTCGAGGCTAGAGGACGAGTTGCGACATGCCTTGATTAGGAACACGGTTCCACTTGACGCTGACAGGCTCTATGGGTCGATCAGAAGGGATAGTCTCTCGTTCTCATCGAATTATGGGGAGCTTGGCGAGAATTTTGAAAGCTTCGATGAGGTCAATGATTGCGATTCTGCACGGTTTCATGAGCGCGGTGCCAGCTTGGCCGACGATGTCTTCGTTGATTTGATAAATCCAGACGGGGTGGAAGAGCTAAGAGAGATTGCTGACCGAATGCTCAAGTCTGGCTACGAAAGGGAGTGCCTTCAGGTTTATAGCAATATTCGTCGCAACGCCTTGGATGAGTGCTTGGCTATCCTGGGGGTCGAGCGACTGAGTATCGAAGAGGTTCAGAGGATTCAGTGGTACTTGTTGGACGAGAAAATGAAGAAATGGATATACGCTGTTAAAATTGTTGTCAGGGTGCTCCTCACCGGCGAGAAGAGGCTATGTGACTGTATATTTGAAGAATACAGCGATGTCTGTTTCAACGAGACTGCAAAAGGGTGTGTTATGCAGTTGTTGAATTTTGGTGAGGCCGTTGCAATTATTAGAAGATCACCGGAGAAGTTGTTCAGGATATTAGATATGTACGAGGCTTTGAGGGATGTGTTCCCTGACCTGGAAGCTTTGATTTCAGATGATTTTGTGATTAGTGAAGCCAAAGGATTGCTAACTGTGCTCGGTGAGGCAGCTAAAGGTTCATTTGCTGAGTTTGAGAATGCTGTTCGTAATGAGACTTCCAAAAGGCCAGTCTTAACTGGGGGTCTTCATCCAATGCCACGTTATGTGATGAACTACATGAAGTTGCTAATGGATTATGGTGACTCTCTAGACTCACTTTTAGAAGTAAGTGAAGAGGATCTTGATCGGTTTCAAAAAACCCACGGCGGTGACAGTTCTCAGTTGGAGACCATGTCCCCCTTACATCAGAGAATGCTGTTTTCCATGTCAGAGCTGGAGTATAATCTTCAGGAAAAATCTAGAATCTATGAGGACAGTGCAATGCAGTATATATTTTTGATGAACAATATTTACTACATTGTGAGAAAAGTGAAAGATTCAGATCTTCGGAACGTCCTAGGAGATGACTGGGTTCGAAAGCGCCGGGGTCAGATACGCCAGTATGCGACGGCCTACCTCAGGGCCTCTTGGACCAAGGCATTGTCCTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAGTAATGCCTCAAAGAATGCTTTGAAGGAAAGGTTCAAGAATTTTAATGCATGCTTTGAGGACATTTACAGGATTCAGACTGCTTGGAATGTGCCGGATGCTCAGCTTCGGGAAGAATTACGAATCTCTATATCAGAGAAGGTGATTCCTGCATACCGCTCGTTTGTGGGAAGGTTTGGTAGTCAGCTAGAGGGAAGGCATGCTGGGAAGTACATTAAGTATACGGCTGAGGATTTAGAAAGCTATTTATTGCACTTATTTGAAGGAGAGCCTAAAGTATTGCACCACGTGAGGAGAAAGAGTACATAG 1989 0.4731 MAATTTTPTSLGDGADDRLLATAQQIVRSLNTPKEVREDMLLIFSSFDNRLSSITDLINGEDSKPSATEEDLDRFQAAEKVILRWDGSGSGAPSRESNSLLHSRGDVVEYLCAVDDIIQWIEQISIAPSGKETQILIDRADNAIQLAMSRLEDELRHALIRNTVPLDADRLYGSIRRDSLSFSSNYGELGENFESFDEVNDCDSARFHERGASLADDVFVDLINPDGVEELREIADRMLKSGYERECLQVYSNIRRNALDECLAILGVERLSIEEVQRIQWYLLDEKMKKWIYAVKIVVRVLLTGEKRLCDCIFEEYSDVCFNETAKGCVMQLLNFGEAVAIIRRSPEKLFRILDMYEALRDVFPDLEALISDDFVISEAKGLLTVLGEAAKGSFAEFENAVRNETSKRPVLTGGLHPMPRYVMNYMKLLMDYGDSLDSLLEVSEEDLDRFQKTHGGDSSQLETMSPLHQRMLFSMSELEYNLQEKSRIYEDSAMQYIFLMNNIYYIVRKVKDSDLRNVLGDDWVRKRRGQIRQYATAYLRASWTKALSCLKDEGIGGSSSNASKNALKERFKNFNACFEDIYRIQTAWNVPDAQLREELRISISEKVIPAYRSFVGRFGSQLEGRHAGKYIKYTAEDLESYLLHLFEGEPKVLHHVRRKST 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4820g00104 662 Pfam Exo70 exocyst complex subunit 289 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pral4820g00104 662 SUPERFAMILY Cullin repeat-like 73 648 IPR016159 -
Pral4820g00104 662 Gene3D Exocyst complex component Exo70 92 655 - -
Pral4820g00104 662 PANTHER EXOCYST COMPLEX PROTEIN EXO70 69 649 IPR004140 GO:0000145|GO:0006887
Pral4820g00104 662 FunFam Exocyst subunit Exo70 family protein 94 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4820g00104 Pral-Chr4820 498195 500804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4820g00104 17 661 EXO70 exocyst subunit family AT5G50380 60.651 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4820g00104 K07195 - gmx:100818693 939.873