Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4820g00086 ATGGAGAACAACCAGCACCAGCAAGCCCAGTCCTCCCCGTACCCACCTCAAACCCCTGCTCCTCCTCCTTTCCACCACCTTCTCCAGCAGCAGCAGCAGCAGCTCCAGATGTTCTGGTCTTACCAGCGCCAAGAAATCGAGCATGTCAACGATTTCAAGAACCACCAGCTCCCCCTTGCTCGAATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCCGAGGCCCCCATTTTGTTCGCCAAGGCCTGTGAGCTTTTCATCCTTGAGCTCACCATTCGATCTTGGCTCCATGCCGAGGAGAACAAGAGGAGGACCCTCCAGAAGAATGACATAGCCGCTGCCATCACCAGGACTGATATCTTTGATTTCTTGGTCGATATTGTGCCCAGAGATGAGATCAAGGACGAGGCTGGCCTTGGTGGCATTGTGGGTACCACGGCCAGTGGTGTTCCTTACTATTATCCTCCCATGGGCCAACCTGCTGGCCCTCCAGGAGGCATGATTATTGGACGGCCGGCCGTGGATCCCACCGGAGTGTACGTGCAACCTCCATCGCAGGCTTGGCAGTCGGTATGGCAGACAGCCGGTGAGGATGGATCATATGGTAGCGGTGGCAACAGTGGACAGGGCAACCTTGATGGTCAGAGTTGA 663 0.5596 MENNQHQQAQSSPYPPQTPAPPPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGIVGTTASGVPYYYPPMGQPAGPPGGMIIGRPAVDPTGVYVQPPSQAWQSVWQTAGEDGSYGSGGNSGQGNLDGQS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4820g00086 220 Gene3D Histone, subunit A 24 134 IPR009072 GO:0046982
Pral4820g00086 220 MobiDBLite consensus disorder prediction 193 220 - -
Pral4820g00086 220 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 19 151 - -
Pral4820g00086 220 Pfam Core histone H2A/H2B/H3/H4 24 119 IPR007125 GO:0003677
Pral4820g00086 220 FunFam Nuclear transcription factor Y subunit gamma 25 134 - -
Pral4820g00086 220 SUPERFAMILY Histone-fold 14 128 IPR009072 GO:0046982
Pral4820g00086 220 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4820g00086 Pral-Chr4820 434521 437970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4820g00086 24 219 CCAAT-HAP5 Transcription Factor Family AT3G48590 88.614 2.53e-110 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral4820g00086 CBFD_NFYB_HMF 2.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4820g00086 - - pcin:129320575 337.806