Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4820g00050 ATGATGGAAAAAGATTCAAACTTTGAGCTTGATGTGAAGCAAGGAGAACCAATTCTGGTTCCACCTGCAGAAGAAACAGACAAGGGTCTTTACTTCCTCTCAAACCTGGACCAGAACATAGCAGTTCCCGTTCGCACAGTTTATTGTTTCAAATCTGATTCTCGAGGGAACGAGGATGCTGCAACAGTGATAAGAGAGGCCTTGTCTAAGATTCTTGTTCCTTATCATCCCATGGCCGGCAGGTTAATAATCAGTTCAGAGGGGAAGTTGATAGTAGATTGTACTGGTGAGGGTGCAGTGTTCGTTGAAGCTGAAGCGAACTGCGACATAGAAAAAATTGGAGATTTGACAAAACCTGATCCTTCAACTCTTGGCAAACTGGCTTATAGCGTCCCTGGTGCCAAGAACATAATTGAGATGCCCCTTATGACTGTTCAGGTGACAAGATTCAAGTGTGGAGGCTTTACTTTGGGGTTGGCCATGAACCACTGTATGAAAGATGGACTGTGTGCTATGGAATTTGTAAACGCATGGAGTGATGCTGCAAGAGGCTCAGACTTAAAGATTCCTCCATTTCTTGATCGAACCATACTGAAAGCACGCGAGCCTCCTCTTATAGAATTCCCCCACCATGAATTTGCAGAGATTGAAGACATATCAGATACCTCAAAACTATACGAGGAAGAAGACATGCTCTACAAATCCTTCTGTTTCGATCCAGACAAGGTGGAGCTTCTCAAGAAGAAAGCCATGGAAGATGGGGTTCTTCAAAAGTGCTCTACTTTTGAAGCCCTTTCTGCTTTTGTATGGAGAGCTCGAACTGAAGCCTTGAGGATGAAACCTGATCAACAAACCAAGCTTCTTTTCGCTGTTGATGGACGGTCCAGATTCGATCCTCCAATACCAGAAGGCTTCTTCGGAAACGCCATAGTGTTGACAAATTCACTGTGTGAGGCAGGCGAGTTATTGACGAATCCTCTATCTTTCGCAGTTGGGTTGGTTCAAAAGGCCATTGATATGGTGACAGATAGGTACATGAGATCAGCTATAGACTATTTTGAAGTGACAAGAGCAAGGCCTTCCTTAACCGCGACGCTTTTGATTACAACTTGGGCGCGGTTGTCTTTCCACACAACAGATTTTGGATGGGGACAACCTCTGTGTTCTGGGCCCGTGACATTGCCTGAGAAAGAGGTCGTCTTGTTCCTCTCTCATGGGGAAGAGAGGAAGAACATTAATGTTCTTCTGGGTTTGCCTGCTTCTGCCATGGAAATCTTTGAAGCACTGATGCAGTTATGA 1299 0.448 MMEKDSNFELDVKQGEPILVPPAEETDKGLYFLSNLDQNIAVPVRTVYCFKSDSRGNEDAATVIREALSKILVPYHPMAGRLIISSEGKLIVDCTGEGAVFVEAEANCDIEKIGDLTKPDPSTLGKLAYSVPGAKNIIEMPLMTVQVTRFKCGGFTLGLAMNHCMKDGLCAMEFVNAWSDAARGSDLKIPPFLDRTILKAREPPLIEFPHHEFAEIEDISDTSKLYEEEDMLYKSFCFDPDKVELLKKKAMEDGVLQKCSTFEALSAFVWRARTEALRMKPDQQTKLLFAVDGRSRFDPPIPEGFFGNAIVLTNSLCEAGELLTNPLSFAVGLVQKAIDMVTDRYMRSAIDYFEVTRARPSLTATLLITTWARLSFHTTDFGWGQPLCSGPVTLPEKEVVLFLSHGEERKNINVLLGLPASAMEIFEALMQL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4820g00050 432 Gene3D - 11 215 IPR023213 -
Pral4820g00050 432 FunFam Spermidine hydroxycinnamoyl transferase 10 213 - -
Pral4820g00050 432 FunFam Tryptamine hydroxycinnamoyl transferase 217 431 - -
Pral4820g00050 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 428 - -
Pral4820g00050 432 Gene3D - 216 431 IPR023213 -
Pral4820g00050 432 Pfam Transferase family 19 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4820g00050 Pral-Chr4820 302545 304352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4820g00050 19 430 Monolignol Biosynthesis Gene Families AT5G48930 37.442 2.85e-90 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4820g00050 K15400 - gmx:100794490 721.079