Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4820g00043 ATGGCACTCGAACCAGAGAAAACATGCGAAGATGCTAAATCTCCGTCTGCTCCAGCTGAAAACCTTCAGACAGAGGTTCATGTCCCCAGTAATGAAAGAACCAAAACGACAAGACACCCTCGATGGAGCAGACAGGAAACGATCATCCTCATAGGTGCCAAGAAGATGGTTGAGAATGGAGGGTCTCCGGTTTACCGGTTCAGTCACTCCGAACCAAAATGGGATTTGGTCTCATCGTTCTGTCAAAAACGCGGTGTGAACAGAGGACCTGTTCAGTGTCGAAAGAGATGGAGCAATCTTCTAAGCGATTTCAAAAAGATTAAGAAGTGGGAGACGAATATACAGCACGAGTCTGAGTCATTCTGGATGATGAGAAACGATGAACGGAGGGAGAAGAAATTGCCAGGTTTCTTCGACGGGGAGGTTTACAACGTATTAAACGGAGAAGCGTGCACTGCTTCAGCATTTCCGTTGACACTAATTAAAGTCCCAAAAGCAGAGAATGGTGATGGAGGTGCAGCAATGGCGTCGGAGCAATGTGAGGAGGAGGAGGATGAAGAGGATGAGGAGGCGGAGGCCATCGTTGACAGTGAGAAAATGGCTTGGAGCACAGAGGACGAAGCCTTTGAGATAATCACGAGTGGGAAGAAAGTCACCGATCCGTTGATTGCTTCAAGTGTTGAGGAAACAATCCCGATAAGGAATCCAGGAAAGACACCCACTCATCCTCGGCTTAGTTCAGGACATAGAGAACCCAAGCACTCACTTCTATGGAAATCTGAAGCAAATTACACAGGCTCAGGCAAGAGAATAGAGAATATGTCCATGTCCCAAGAGGGGTGCAAGAAAAGGCGAGTGTCACCAGACAACCATGAGGACACCGCAGCTTTCAGGAATCCGTTGATGAAAGTGCTGAGAAGGAATGGCAACATGCTGAAAGCTCATCTTAGCGATCAAAATATAAGTTACCAGTTGGCCAGGGATCAGCAAAAGGAGCAAACAAGCAACATAGTTGCTGCACTAGGCAAGCTCACGGATGCTCTCATAAAAATTGCTGAAAAGCTTTGA 1068 0.47 MALEPEKTCEDAKSPSAPAENLQTEVHVPSNERTKTTRHPRWSRQETIILIGAKKMVENGGSPVYRFSHSEPKWDLVSSFCQKRGVNRGPVQCRKRWSNLLSDFKKIKKWETNIQHESESFWMMRNDERREKKLPGFFDGEVYNVLNGEACTASAFPLTLIKVPKAENGDGGAAMASEQCEEEEDEEDEEAEAIVDSEKMAWSTEDEAFEIITSGKKVTDPLIASSVEETIPIRNPGKTPTHPRLSSGHREPKHSLLWKSEANYTGSGKRIENMSMSQEGCKKRRVSPDNHEDTAAFRNPLMKVLRRNGNMLKAHLSDQNISYQLARDQQKEQTSNIVAALGKLTDALIKIAEKL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4820g00043 355 MobiDBLite consensus disorder prediction 276 292 - -
Pral4820g00043 355 SUPERFAMILY Homeodomain-like 38 109 IPR009057 -
Pral4820g00043 355 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 23 355 - -
Pral4820g00043 355 MobiDBLite consensus disorder prediction 260 274 - -
Pral4820g00043 355 Gene3D - 42 106 - -
Pral4820g00043 355 ProSiteProfiles Myb-like domain profile. 34 101 IPR001005 -
Pral4820g00043 355 MobiDBLite consensus disorder prediction 232 293 - -
Pral4820g00043 355 Coils Coil 173 193 - -
Pral4820g00043 355 Pfam Myb/SANT-like DNA-binding domain 40 124 IPR044822 -
Pral4820g00043 355 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4820g00043 Pral-Chr4820 226099 228065 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral4820g00043 Myb_DNA-bind_4 2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4820g00043 - - tpra:123916032 328.946