Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4820g00034 ATGGACTGCACAACATGGAATAACTTAGCTATGGCTCTAGTGTTGCTTCACTTGAGCTTAATTATGCCCGTCTTCTCACTCTCGTCTCACCCAGATAGGATCCTACGGCTTCCCGGACAACCCCACGTACGTTTCCAACACTACTCAGGATACGTCACAGTCGATGACAAGAAACATAAAGCTTTGTTCTACTATTTTGTTGAATCTGAAACCGATCCTGCTTCTAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCCCTTGGGGTTGGAGCATTCTCTGAAAATGGACCCTTCAGACCAAATGGTGAAGTTCTGATTAAAAATGATTACAGCTGGAACAAAGAGGCAAACATGCTATATTTGGAGGCACCGATTGGAGTGGGATTTTCTTACGCTAAAGACGGATCTTATACGGTGGACGATAACGAAACTGCCAGGGACAATCTCATGTTTCTGAAACTCTGGTTCAACAAGTTCCCTCAATACAGGCGAAGAGATTTCTTTCTTACTGGGGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGACCTCAACAAGAAGGAAAAGATATTTAATCTTAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATACGCCACGGACTTCAACTCACGGGCCGAGTTCTTCTGGTCGCATGGATTGATATCAGATTCCACATACAGAATGTTCACCTCAGTGTGTAATTATTCTCGGTACGTCAGTGAGTATTATAGAGGCTCAGTTTCGCCTCTTTGTTCAAAGGTTATGAGCCAAGTAAGCACAGAAACAAGTAAATTCGTGGACAAATACGATGTGACACTTGATGTCTGCATTTCCTCAGTTCTTTCGCAGTCCAAGGCCATTTGCCCTCAAACACAACAACGAAATGAGAGGATAGACGTATGTGTTGATGACAAAGTTGTAAATTACCTGAACCGAAGAGATGTTCAGGAGGCACTTCATGCCAAACTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAACGTACTGGACTACGATATGCTCAATCTGGAAGTACCTACGCTTCCTATTGTTGGGTCAATAGTCAAAGCTGGAGTCCAAGTCTTAATTTACAGTGGAGATCAAGATTCTGTAATTCCACTAACTGGTAGCCGTACCTTGGTTCAGAAACTAGCAACGCAATTAGCACTAAATACCACTGTTCCTTACAGAGTATGGTTCCACGGTCAACAGGTTGGCGGGTGGACTCAAGTTTATGGAGATAATAAGCTGTCATTTGCGACCGTAAGAGGGGCTTCCCATGAAGCTCCGTTCTCGCAGCCTGAGAGATCACTAACGCTGTTCAAGTCATTCTTGCAAGGGAGGCCTCTACCTGCTGATATTTTCTGA 1398 0.4421 MDCTTWNNLAMALVLLHLSLIMPVFSLSSHPDRILRLPGQPHVRFQHYSGYVTVDDKKHKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNDYSWNKEANMLYLEAPIGVGFSYAKDGSYTVDDNETARDNLMFLKLWFNKFPQYRRRDFFLTGESYAGHYVPQLAKLMIDLNKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYRMFTSVCNYSRYVSEYYRGSVSPLCSKVMSQVSTETSKFVDKYDVTLDVCISSVLSQSKAICPQTQQRNERIDVCVDDKVVNYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDMLNLEVPTLPIVGSIVKAGVQVLIYSGDQDSVIPLTGSRTLVQKLATQLALNTTVPYRVWFHGQQVGGWTQVYGDNKLSFATVRGASHEAPFSQPERSLTLFKSFLQGRPLPADIF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4820g00034 465 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Pral4820g00034 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Pral4820g00034 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Pral4820g00034 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Pral4820g00034 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Pral4820g00034 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Pral4820g00034 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 444 IPR001563 GO:0004185|GO:0006508
Pral4820g00034 465 Gene3D - 357 457 - -
Pral4820g00034 465 FunFam Carboxypeptidase 27 461 - -
Pral4820g00034 465 Gene3D alpha/beta hydrolase 29 288 IPR029058 -
Pral4820g00034 465 FunFam Carboxypeptidase 357 457 - -
Pral4820g00034 465 SUPERFAMILY alpha/beta-Hydrolases 36 461 IPR029058 -
Pral4820g00034 465 Pfam Serine carboxypeptidase 39 457 IPR001563 GO:0004185|GO:0006508
Pral4820g00034 465 Gene3D - 311 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4820g00034 Pral-Chr4820 165121 168016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4820g00034 319 460 Calmodulin-binding Proteins AT2G22960 28.169 4.31e-15 71.6