Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4820g00028 ATGAAAACAACCGACAACTCCGATCCAATCACTCTCTCTGATCAGCTTTCCTCTCTTCTCGGCGAAATCCCTGCCATTCTTCACTTGAAAGGTAAATGGTCCCTCATCGCTTCAAAACTCCATCTTCTTCGCTCTCGACTTGCCGATTTCTCCTCCCACTTCCCCCACTCCTCCTCCTCCAACTCACTATCCAGAGACCTTCTTCTCTCCATAGCCCAGACGCTCAACGATGCCGTTTCCCTCGTCAAGGATTGCCAGCTCCCCACCTTGTCCCACGGCAAGCTCAAGACCCAGAGCCTCATTGATTCCCTCCTTGCCAGCCTCGATCGCCACCTCTCAGACTGCGATGTTCTCCTCAAAAGTGGTGTCCTCCGGGACGATGCCATTTCAACTGCGTCTAACAGGGACGCTGTTCGTTCTGAATTAAGGAATTTGACCGCTCGTTTGCAAATTGGGTCCTCTGACTCTAGGATTTTCGCTATGGACTCCTTTCTGGGTTTACTACAAGAGGATGATAAGAATGTGATGATAGCTGTGGCACAGGGTGTGGTTCCCTTGCTCGTTCGCTTACTGGATTCGAGCTCTTCGGAAATGAAGGAGAAGATCGTCGCCGCGATATCCAGAGTTTCAATGGTGGATAGCATCAAGCATGCATTAATTGCCGAAGGTTTGGTTCTTTTGAATCACCTGCTTCGAATCCTTGACCATGGAAGTGGGTTTGCCAAAGAGAAAGCTTGTACTGCCCTCCAAGCTCTAACGTTCTCGAGGGAGAACGCGAGGGCAATCGGTTCTAGAGGTGGAATTTCTTCTCTATTGGACATTTGCCAAGTTGGCACGCCTGGTTCCCAGGCTTCTGCAGCTGGAGTTCTTAGAAATCTTGTGGTTTACCCTGAAGTCAGAGTTCATTTCGTCGAGGAAAATGCGGTTGTTGTTCTGCTCGGGCTCGCTTCTTCGGGTACTGCAATAGCCCAAGAAAACGCAATTGGTTGTTTGTCTAATCTAATTTCTGACGACGAAAGCTTGAAATTAACGAGTGTTAAGGAAAGAGGGATTGAGTGTCTGAAGAATTTCTGGGACTCAGTTTCGTCCGTTCAGAGTCTTGAAGTAGCAATTGAGTTATTGAGAAGCCTGGCTTCGAGTCCGTCGATTGCCGAAGTTCTTATTTCAGATGGGTTTGTTCAGAAACTGGTGGGCGTGTTACATTGTGGTGTACTAAGGGTGAGAATTGCAGCCGCTCGAGCTGTTTATACTCTAGGGTCCAGCACCACAAAGGCGAAGAAAGAGATGGGCGAATGTGGATGCATTACTCCATTGATACAGATGTTAGATGGCAAAGCTGTTGAAGAGAAAGAAGCAGCTGCAATGGCATTATCAATACTCATGTTCTATACAGGCAATAGGAGGATTTTCCGGAAGGACGAGAGGGGTATAGTGAGTGCTGTTCAGCTGTTGGATCCTTCAATAGAGAATTTAGATAAGAAATACCCAGTTTCCATTCTGGTCTCACTTGTGCATTCCAAGACCTGTAGAAAACAAATTGCAGCAGCTGGTGCTAGTGTACATACACGAAAACTTGTAGAGATGAATGTTGAGGGATCTAAGAAACTCTTGGATAGCCTTGGTCGCGCAAAGGTATGGGAAGCATTAGCAAGATCATTCGGATGA 1665 0.4727 MKTTDNSDPITLSDQLSSLLGEIPAILHLKGKWSLIASKLHLLRSRLADFSSHFPHSSSSNSLSRDLLLSIAQTLNDAVSLVKDCQLPTLSHGKLKTQSLIDSLLASLDRHLSDCDVLLKSGVLRDDAISTASNRDAVRSELRNLTARLQIGSSDSRIFAMDSFLGLLQEDDKNVMIAVAQGVVPLLVRLLDSSSSEMKEKIVAAISRVSMVDSIKHALIAEGLVLLNHLLRILDHGSGFAKEKACTALQALTFSRENARAIGSRGGISSLLDICQVGTPGSQASAAGVLRNLVVYPEVRVHFVEENAVVVLLGLASSGTAIAQENAIGCLSNLISDDESLKLTSVKERGIECLKNFWDSVSSVQSLEVAIELLRSLASSPSIAEVLISDGFVQKLVGVLHCGVLRVRIAAARAVYTLGSSTTKAKKEMGECGCITPLIQMLDGKAVEEKEAAAMALSILMFYTGNRRIFRKDERGIVSAVQLLDPSIENLDKKYPVSILVSLVHSKTCRKQIAAAGASVHTRKLVEMNVEGSKKLLDSLGRAKVWEALARSFG 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4820g00028 554 Gene3D - 359 539 IPR011989 -
Pral4820g00028 554 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 182 224 IPR000225 GO:0005515
Pral4820g00028 554 Gene3D - 131 358 IPR011989 -
Pral4820g00028 554 Pfam Armadillo/beta-catenin-like repeat 171 207 IPR000225 GO:0005515
Pral4820g00028 554 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 15 547 - -
Pral4820g00028 554 SMART arm_5 296 336 IPR000225 GO:0005515
Pral4820g00028 554 SMART arm_5 255 295 IPR000225 GO:0005515
Pral4820g00028 554 SMART arm_5 171 211 IPR000225 GO:0005515
Pral4820g00028 554 SMART arm_5 422 462 IPR000225 GO:0005515
Pral4820g00028 554 SMART arm_5 380 420 IPR000225 GO:0005515
Pral4820g00028 554 SUPERFAMILY ARM repeat 141 490 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4820g00028 Pral-Chr4820 119832 121756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4820g00028 128 408 U-box Gene Family AT2G23140 28.269 2.33e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4820g00028 - - qsa:O6P43_023524 712.22