Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4820g00027 ATGGATGATGGACACCAGCGTGAAAATGGAAGACAAAAGGTGGACTACTACAGAGGAGCTCATTCCCTGTGGAGCATGGCTCCCCAGCCTCAGGTAAAGGAACCAAATGCCCTGGTTATGAATAAGAAAATTATGTCTGTTATTGCCGAGAGAGAAGCAGCAATTCGAGAATGTAATGCAGCTTTATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGAAGCCCTTCGGCAGAGGGACGAAGCGCTTCTGCAGAGGGATAATGCCTTGATGGAACGGGATAATGCTCTTGCTGCCCTTCAAATCCAGCATAATGCTACCAACTTCTCATTGGGTTGTGGCTCTCAACGTGGATCAAAGCGGATGCACCATTCCTCAAATCATTTCAGTCAAATGGCAGAAGGTACTTATAGAACAAAGGATTTGACCACAACTAATGCCCTTCCGGTAACTATAGTCTCTTCTGAAGCAGGCAAGTATAATCAGGCCAAGAGAACAAGGGAGAACAAGGCAGATTCTTCTAAGGCGTCAAAACCACCAGGCAAAGGGAAAAAAGTGAGTGAGGACTTGAATAGGCGGGCTTCTTCCGAAGTGACAAAGATCAAGTCTGAGTGGGATAAACAGGATGTTGGATTGAATTTGATTCAATTTGATGAAAATACCATGCCAGCCCCTGTTTGCACATGTACTGGAGTACCACGGCAATGCTACAAATGGGGGAATGGTGGGTGGCAGTCATCTTGTTGTACCACCACCTTGTCCATGTATCCGCTACCGCAGCTTCCAAACAAGCGACATGCACGAGTTGGAGGGCGAAAGATGAGTGGAAGTGTATTTACAAGACTTCTTAGCAGGGTGGCCGCTCAAGGCCGTGATTTATCTATACCATTGGATCTCAAGGACTACTGGGCCAGACACGGAACAAATCGCTACATCACCATCAAGTAA 948 0.4662 MDDGHQRENGRQKVDYYRGAHSLWSMAPQPQVKEPNALVMNKKIMSVIAEREAAIRECNAALSEKNEALAARDEALRQRDEALLQRDNALMERDNALAALQIQHNATNFSLGCGSQRGSKRMHHSSNHFSQMAEGTYRTKDLTTTNALPVTIVSSEAGKYNQAKRTRENKADSSKASKPPGKGKKVSEDLNRRASSEVTKIKSEWDKQDVGLNLIQFDENTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARVGGRKMSGSVFTRLLSRVAAQGRDLSIPLDLKDYWARHGTNRYITIK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4820g00027 315 Coils Coil 59 92 - -
Pral4820g00027 315 MobiDBLite consensus disorder prediction 158 196 - -
Pral4820g00027 315 Pfam GAGA binding protein-like family 1 315 IPR010409 -
Pral4820g00027 315 MobiDBLite consensus disorder prediction 161 196 - -
Pral4820g00027 315 SMART GAGA_bind_2 1 315 IPR010409 -
Pral4820g00027 315 PANTHER - 1 315 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4820g00027 Pral-Chr4820 114489 116523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4820g00027 1 315 BBR or BPC Transcription factor family AT2G21240 56.782 1.43e-125 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pral4820g00027 GAGA_bind 1.4e-98 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4820g00027 - - jre:108986984 500.36