Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4820g00016 ATGAATTTTATGAAGAATGGAGTTCGCAGATTGCCCCCTGGATTTAGGTTCCAGCCAACAGATGAAGAGCTTGTGTTTCAGTACTTAAAATGCAAGGTTCTTTCATGTCCACTGCCTACATCGATCATTCCTGAAGTCAATGTCTGCAACTACGATCCTTGGGATTTGCCAGGTAATTGTGAAGAACAGGAGAGGTATTTCTTCAGTCACAAGGAAGCGAAATACAGAAATGGTAATCGAATGAACCGAACGACCAGGTCTGGGTATTGGAAGGCAACTGGTTCAGACAAGAAAATATCGTCTCCAACAAATAACAACAACAATAATAGTTTTTCTGGGGTGAGAAAAACCTTAGCATTTTACGAAGGGAAGGCTCCAAACGGCTCTAGAACTAACTGGGTCATGCACGAATATCGCCTTGTCATTGCAGAAACGAGCGCTCCCAACTCAACCCACCTGAGTCATGGGAAGGAGGTAGGAGACTGGGTTCTGTGTCGGATAAGCATGAAGGCGGGAAGAGAAGGCGGTGAGGCGAGAATGATGAGGAGAAGCTCAGAGATAGATGTTGATGTGGGAGAAACAAGATTCTTTGATTTTACGAGGGTAACAGGGATTGCTGCGAAACTCCATTATTCTGACACGTCATCGTCTTGTTCCAGTTCTAGCGACATCACAGAGGTGTGTTCATACGTAGCAGATCATGAAGAAACAAGTGGCCATAGCTATAGTACTGCTGGCTCCTAA 744 0.4476 MNFMKNGVRRLPPGFRFQPTDEELVFQYLKCKVLSCPLPTSIIPEVNVCNYDPWDLPGNCEEQERYFFSHKEAKYRNGNRMNRTTRSGYWKATGSDKKISSPTNNNNNNSFSGVRKTLAFYEGKAPNGSRTNWVMHEYRLVIAETSAPNSTHLSHGKEVGDWVLCRISMKAGREGGEARMMRRSSEIDVDVGETRFFDFTRVTGIAAKLHYSDTSSSCSSSSDITEVCSYVADHEETSGHSYSTAGS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4820g00016 247 SUPERFAMILY NAC domain 8 170 IPR036093 GO:0003677|GO:0006355
Pral4820g00016 247 Gene3D NAC domain 20 173 IPR036093 GO:0003677|GO:0006355
Pral4820g00016 247 PANTHER NAC TRANSCRIPTION FACTOR 56 11 212 - -
Pral4820g00016 247 ProSiteProfiles NAC domain profile. 11 170 IPR003441 GO:0003677|GO:0006355
Pral4820g00016 247 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Pral4820g00016 247 MobiDBLite consensus disorder prediction 86 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4820g00016 Pral-Chr4820 66028 67384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4820g00016 1 170 NAC Transcription Factor Family AT5G13180 60.000 1.68e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4820g00016 NAM 3.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4820g00016 - - gmx:100803200 296.204