Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4817g00017 ATGGGCAGATCTCCTTGCTGCGAGAAAGAGCACACCAACAAAGGAGCCTGGACCAAAGAGGAAGACCAACGCCTCATCAACTACATCAAGGTCCATGGCGAAGGTTGCTGGAGATCCCTCCCCAAAGCTGCTGGCTTGCTTAGATGTGGCAAGAGTTGCAGACTCCGATGGATTAACTATCTCCGACCTGATCTCAAGCGAGGCAACTTCACTGAGGAAGAAGACGAGCTCATCATTAGCCTCCACAGCCTCCTTGGCAACAAATGGTCTTTAATCGCGGCGAGGTTACCGGGCAGAACCGACAATGAGATCAAGAACTACTGGAACACCCACATCAAACGCAAACTCTACAGCCGCGGTATTGACCCCCAAACGCATCGACCGCTCAACGCGGCTGCCGCAGCAACCACCGATACCGGTGCCGTCGTCAGCAGCAGCAACGACGGCGGTAATAACAATAACAGCAAGTTCCAGTTGGTAACTGAGTTGGGCAGCGCCAACAACAATAATGCTACAAAGATCGTAAAAACTGAATCGCCCTGCGAGGACTCCAACAGCAGCAGTGGGGTTACCACAGAAGAAGCCGCCTGTGCACATGCTCAGCTCAACTTGGAGCTCACCATAGGCCTTCCCTCTGATCAGCCTTCTTCTGTAAACCAGGACAAGTTTAAACAACGACAGCCACAAGAGCATCCTCGGCCAGAACAACAAGTGTTGTACCACTGGTATGGCAACTTTAATAGTGCTGGTCAAGGTGTGTGTTTGTGTTACGGTCTAGGGTTTCAAAGTAAGGATCAAGCATGTAGCTGCAAATTAGCCATGGGTGCTGTCGTGGTTGCTCCTAATGCTAGTACCCCTCCTACTGTTACTGAAACTGCGACCGATACCATGTATAGATTTTACACCCCCATGAATATTTAG 921 0.506 MGRSPCCEKEHTNKGAWTKEEDQRLINYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIISLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAAAAATTDTGAVVSSSNDGGNNNNSKFQLVTELGSANNNNATKIVKTESPCEDSNSSSGVTTEEAACAHAQLNLELTIGLPSDQPSSVNQDKFKQRQPQEHPRPEQQVLYHWYGNFNSAGQGVCLCYGLGFQSKDQACSCKLAMGAVVVAPNASTPPTVTETATDTMYRFYTPMNI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4817g00017 306 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 212 - -
Pral4817g00017 306 CDD SANT 69 112 IPR001005 -
Pral4817g00017 306 Gene3D - 14 66 - -
Pral4817g00017 306 SMART sant 13 63 IPR001005 -
Pral4817g00017 306 SMART sant 66 114 IPR001005 -
Pral4817g00017 306 Gene3D - 68 136 - -
Pral4817g00017 306 FunFam Myb transcription factor 68 137 - -
Pral4817g00017 306 CDD SANT 16 61 IPR001005 -
Pral4817g00017 306 MobiDBLite consensus disorder prediction 209 223 - -
Pral4817g00017 306 FunFam MYB-related transcription factor 13 66 - -
Pral4817g00017 306 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4817g00017 306 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pral4817g00017 306 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4817g00017 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral4817g00017 306 MobiDBLite consensus disorder prediction 209 233 - -
Pral4817g00017 306 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Pral4817g00017 306 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4817g00017 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4817g00017 Pral-Chr4817 83044 84340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4817g00017 1 212 MYB Transcription Factor Family AT4G09460 62.780 1.42e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4817g00017 Myb_DNA-binding 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4817g00017 K09422 - gmx:100808083 397.512