Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4817g00015 ATGGATAAGTACGAGGAGGTGAAGGATTTGGGAGCTGGCAATTTCGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAGCTCGTCGCCATGAAATATATCGAGCGTGGTGGCAAGATTGATGAGAACGTGGCGAGAGAGATTATGAACCACAGGTCCCTTCGACACCCCAATATAATCCGATTCAAGGAGGTCATTTTGACCCCCACACATTTAGCCATAGTAATGGAGTATGCAGCGGGGGGAGAACTATTTGAGAGGATATGCAATGCCGGCAGATTCAGCGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATATCTGGTGTCAATTTCTGTCACACCATGCAAATATGCCACAGAGATTTAAAGCTTGAAAATACCCTTTTGGATGGAAGTCCGGCACCTCGCCTGAAAATTTGCGATTTTGGTTATTCCAAGTCATCTTTGTTGCATTCAAGACCCAAGTCTACGGTTGGAACCCCAGCTTATATAGCACCCGAAGTTCTTTCTAGGCGCGAATATGATGGCAAGTTGGCTGATGTGTGGTCATGTGGAGTGACTCTTTATGTGATGCTTGTTGGAGCATATCCCTTTGAGGACCAGGATGACCCAAGGAATTTCCGGAAAACGATCCAGCGAATAATGGCCGTTCAATACAAAATCCCAGATTATGTTCACATATCTCAAGATTGCAGGCACCTCCTCTCTCGCATTTTTGTGGCTAATCCATTGAGGAGAATAACAATCAAGGAAATTAAGATCCATCCATGGTTTCTGAAGAACCTACCAAGGGAGCTAACTGAGTCAGCGCAGGCTGTGTATTACCAGAGAGACAACCCAAGCTTTTATTCTCAGAGTGCGGAGGAAATAATGAGAATTGTTGGAGAGGCAAGAACCCCGCCTCCAGTATCCAGGCCTGTCAAAGGTTTTGGGTGGGAAGGCGAAGAAGAAGAGGAAGAAGAAGGAGCAGAAGAAGAGGTGGAAGAGGAGGAGGAAGAAGATGAAGAAGAAGATGAGTACGACAAGAGGGTGAAGGAGGTTCACGCAAGCGGAGAATTTCAAGTCAGTTGA 1077 0.4643 MDKYEEVKDLGAGNFGVARLMRNKETKELVAMKYIERGGKIDENVAREIMNHRSLRHPNIIRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRRITIKEIKIHPWFLKNLPRELTESAQAVYYQRDNPSFYSQSAEEIMRIVGEARTPPPVSRPVKGFGWEGEEEEEEEGAEEEVEEEEEEDEEEDEYDKRVKEVHASGEFQVS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4817g00015 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pral4817g00015 358 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Pral4817g00015 358 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Pral4817g00015 358 SUPERFAMILY Protein kinase-like (PK-like) 2 305 IPR011009 -
Pral4817g00015 358 Coils Coil 315 339 - -
Pral4817g00015 358 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4817g00015 358 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4817g00015 358 MobiDBLite consensus disorder prediction 315 342 - -
Pral4817g00015 358 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4817g00015 358 MobiDBLite consensus disorder prediction 304 358 - -
Pral4817g00015 358 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Pral4817g00015 358 CDD STKc_SnRK2 3 259 - -
Pral4817g00015 358 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral4817g00015 358 PANTHER SERINE/THREONINE KINASE 3 319 - -
Pral4817g00015 358 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4817g00015 Pral-Chr4817 63506 66611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4817g00015 3 282 CBL-interacting serine-threonine protein kinases AT4G24400 41.497 2.72e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pral4817g00015 Pkinase 6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4817g00015 K14498 - gmx:547968 637.876