Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4816g00061 ATGCAAACCTCCTATTCAATGACGAAAGAAGGTTGTGAGGTTGAAGCAATAGGCATTCACTACAAGATCAGCACACAGAAAAACCAGCATTACTTAACGAAACTTTTTAGGAACACTCCACAACTGAATGAGGAAGAAGATGTTCAAACTCAGAAACCAGAAGAGGAAGCAAAAAAAGAAGCACAAACTTGCGGTGGAGTGAGGCATGTACTCAAGGATGTGAACTTGCAAGCCAAGCCGCGGGAAATGCTGGCCATAGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTTGAGGTTCTTGCTGGTAAAGTAACTCCACAAAGTGGGTCTGTCTTAGTGAACCAGAAGCCTGCAGATAAAGCTCAGTTCAGGAAGATTTCAGGTTATGTTACCCAAAAGGATACTCTGTTCCCCTTACTTACGGTTGAAGAAACTTTGATGTTCAGTGCCAAGTTGAGGCTAAAGCTTTCTCAAGAACAACTCTTCTCCCAGGTCAAGTCTCTGATTCATGAACTAGGACTTGGCCATGTTTCTGGGACTCGGATTGGAGATGAAAACCGTGGGATATCTGGTGGCGAGAGGCGGCGGGTTTCTATAGGGGTTGAAGTCGTACACGATCCGAAGGTTCTGATTCTGGATGAACCCACTTCTGGGCTTGATAGTACTTCTGCACTGCAAATCATTGATATGCTTAAGGTGATGGCTGACTCATGGGGACGAACTATCATCCTTAGTATCCATCAGCCTGGGTTCAGAATAGTGAACTTGTTTAATTCTATATTATTGTTAGCCGGTGGCTCTGTCCTACACCACGGCAATGCGGAGTTGCTGAGTGTGAATATGAGATTAATGGGTCTAGATCCTCCTCTTCACGTTAATGTAGTTGAATTTGCCATTGAATCCATAGAAACGATTCGACAACACCAAAAATGCAAACTAGTTCAGCATGAAACGCCCCTGCATTTGCCAGTAACCGAGCAACAAAAGAAATCTCAAGATGAAGATGACAATAAAAGTGGTAGGTTTACCCTGCAACAGCTTTTTCAACAATCCAGTGTTATTGATAAGCAAATCATCAATACGGGAACTGAATTCACTTGTGATTATGCCAATGCTAGAATGAGAGAAACTATCATTCTCACTCACAGGTTCTCCAAGAATATCTTTCGTACAAAGGAGCTCTTTGCATTTAGGACGATTCAGATGCTCATGTCCGGGCTCATACTGGGATCCATCTTTTGTAATCTTAAGGATGATCTAGTGGGAGCTGTAGAAACGGTTGGTCTTTTTGCTTTCATACTAACATTTTTGTTAACAAGCACAATAGAGGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAGGGAAACCTCATGTGGTAGCTACAGAGTATCATCTTATGCTATTGCCAATGGTGTTGTTTACTTGCCATTTCTGCTCATCCTAGCCATTCTATTCACTGTACCCTTATACTGGCTTGTGGGGCTGAACAGGAATTTCACAGCATTTTTGTACTTCTTGTTGGTAATTTGGTTAATTCTTTACACGGCGAATTCAGTTGTGGTATGTTTCAGTACTCTGGTGCCTAATTTTATTGTTGGGAACTCAGTCATCAGTGGCGTCATAGGATCATTCTTTTTGTTCTCAGGTTACTTCATATCGAAGAACGAGATCCCAAGTTGCTGGATTTTCATGCACTATATATCTCTGTTTAAGTATCCCTTCGAAGGATTTCTGATCAATGAGTTCTCCAACTCAAAAAAGTGCTTGGGGTACATGTTTGGATCATGTATGGTGACTGGAACGAGTGTGCTTAAAGAAGAAGGATATGGTGAGGAAGATAGTAGATGGAAGAACGTGGGGGTCATGGTATGCTTTATCGTGTTCTACAGGTTTATTTCTTATGTAATTCTTAGATATAGATGCTCAAGAAGGGACATTAAGAGCTTCATCATCTGA 1968 0.4182 MQTSYSMTKEGCEVEAIGIHYKISTQKNQHYLTKLFRNTPQLNEEEDVQTQKPEEEAKKEAQTCGGVRHVLKDVNLQAKPREMLAIVGPSGAGKSSLLEVLAGKVTPQSGSVLVNQKPADKAQFRKISGYVTQKDTLFPLLTVEETLMFSAKLRLKLSQEQLFSQVKSLIHELGLGHVSGTRIGDERXRGISGGERRRVSIGVEVVHDPKVLILDEPTSGLDSTSALQIIDMLKVMADSWGRTIILSIHQPGFRIVNLFNSILLLAGGSVLHHGNAELLSVNMRLMGLDPPLHVNVVEFAIESIETIRQHQKCKLVQHETPLHLPVTEQQKKSQDEDDNKSGRFTLQQLFQQSSVIDKQIINTGTEFTCDYANARMRETIILTHRFSKNIFRTKELFAFRTIQMLMSGLILGSIFCNLKDDLVGAVETVGLFAFILTFLLTSTIEALPIFLQEREILMRETSCGSYRVSSYAIANGVVYLPFLLILAILFTVPLYWLVGLNRNFTAFLYFLLVIWLILYTANSVVVCFSTLVPNFIVGNSVISGVIGSFFLFSGYFISKNEIPSCWIFMHYISLFKYPFEGFLINEFSNSKKCLGYMFGSCMVTGTSVLKEEGYGEEDSRWKNVGVMVCFIVFYRFISYVILRYRCSRRDIKSFII 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4816g00061 656 ProSitePatterns ABC transporters family signature. 191 205 IPR017871 GO:0005524|GO:0016887
Pral4816g00061 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 279 IPR027417 -
Pral4816g00061 656 Gene3D - 18 340 IPR027417 -
Pral4816g00061 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 637 - -
Pral4816g00061 656 SMART AAA_5 80 277 IPR003593 GO:0016887
Pral4816g00061 656 Pfam ABC-2 type transporter 379 587 IPR013525 GO:0016020|GO:0140359
Pral4816g00061 656 FunFam ABC transporter G family member 5 56 316 - -
Pral4816g00061 656 Pfam ABC transporter 71 219 IPR003439 GO:0005524
Pral4816g00061 656 CDD ABCG_EPDR 65 274 - -
Pral4816g00061 656 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 292 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4816g00061 Pral-Chr4816 266936 269395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4816g00061 70 279 Calmodulin-binding Proteins AT2G36910 27.103 1.27e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4816g00061 K05681 - gmx:100789722 952.97