Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4816g00059 ATGGCAGATGGAAGCGTCAACCTTCCCCCTGGGTTTCACTTCTCTCCAACGGATGAAGAACTTGTCCTTCACTTTCTTTACAGCAAAATTTCTCTTTTACCATGCCATCCTAACATCATCCCTGATCTTGACATTTCTGTGTCTGATCCTTGGGAATTAAAAGGTAAGGCGTTGTCAAGTGGAAATCAATACTATTTCTTCACCAAGGTGAACGAGAATAGAACCACACGAAGTGGGTATTGGAAAGAAATAGGACTCACCGAGTCTATTGTCTCGGCCGCCGACAAGAAAGTGGGAATCAAGAAGTACCTCGTATTCAACATAGGAGAAGCCCCAGAGGGTGCTGAAACCAGCTGGATAATGCAGGAGTATCAGTTTTGCTCATCAGGGTGTAACACTACATCACATAGAAGTACCAGACGAAGAAGAAAACCGAGCCAGAGCAAATGGGCTTTATGCCGCGTTTATGAAAGAAACAGAGATTCTCAACAAGAAGTGAACTGCTATGATGATGACGACGACGACAGCAGAACAGAGTTGTCATGGCTGGACGAAGTTTTTTGGTCGTTGGATGATGATCTTGAAGAAATTAACCTGACTTATTATTAG 609 0.4351 MADGSVNLPPGFHFSPTDEELVLHFLYSKISLLPCHPNIIPDLDISVSDPWELKGKALSSGNQYYFFTKVNENRTTRSGYWKEIGLTESIVSAADKKVGIKKYLVFNIGEAPEGAETSWIMQEYQFCSSGCNTTSHRSTRRRRKPSQSKWALCRVYERNRDSQQEVNCYDDDDDDSRTELSWLDEVFWSLDDDLEEINLTYY 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4816g00059 202 Gene3D NAC domain 17 163 IPR036093 GO:0003677|GO:0006355
Pral4816g00059 202 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Pral4816g00059 202 PANTHER NAC TRANSCRIPTION FACTOR 56 8 171 - -
Pral4816g00059 202 Pfam No apical meristem (NAM) protein 9 125 IPR003441 GO:0003677|GO:0006355
Pral4816g00059 202 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4816g00059 Pral-Chr4816 259761 261724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4816g00059 1 159 NAC Transcription Factor Family AT1G61110 39.412 2.17e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4816g00059 NAM 5.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4816g00059 - - gmx:100170711 293.893