Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4816g00043 ATGCCCGCTTGGTGGGGAAGAAAGTCCAGCAAGAATAAGGAGGAGCAGCGGCAACAGCAGCTTCCGCAGCCTGAATCACATGGCGGAATTCAGTTTAATTTCATCAAATCACCGATCAGGAATGGTGCCAAGAAAGGAAGAGACAAACCTAAGAGCTTTGACGAGGTCTCAACCGCCATGCTCTCTCGGAGTTCACCCAGAGCCAGCAGGGATTTTACTCCCTCCGCTGCTGCTCCCGTTGGTGGATCGTCCTCGGGATTTTCGTGTTTAGATTCTGATGGTGGCGAGAAGATAGGCCTCCCCTTGCCTCGACCATCGGTTTCGTCCCCGCAGAGCTTGGGGAACGATCAAGGAGATGGAGATGGTTTGGGATCTGCTTCGATCTCTGGTTCAAGCGTGAGTTCTTCTGGGTCCTACGATCACCATCCCATCTCTCAATTTGATGTCATCAGGGGACGAGGTGATATGAAGATTAATATGAGGTCAAAAAGCCCTGGTCCTGGGTCTAGAGGGCCCACCAGCCCGACTTCGCCCCTCCATCCAAGATTGCATGTTCTAAGTATTGACTCTCCTACAGGCAAGCAAGATGATGGAAGGAGTGAATGTCATCCATTGCCTCTACCACCAGGTTCACCGACTAGCCCTTCTGCTCTCTCCAATGCAAGAATAAATAGTCTTCTAGAAAACACTACCAACAATCTGTCCAAGTGGAAGAAAGGAAAGCTTTTAGGACGAGGAACATTTGGTCATGTTTACCTGGGATTTAATAGTGAAAGCGGACAAATGTGTGCAATAAAAGAAGTCAGAGTTTTCTCTGATGATCAAACATCGAAAGAGTGCCTCAAACAGCTTAACCAGGAGATAAATCTTCTCAGTTCGCTTTCGCATCCAAATATTGTTGAATACTATGGGAGTGAACTGGGAGAGGACACACTTTCTGTTTATTTAGAATATGTCTCTGGTGGTTCCATCCATAAACTACTTCAGGAATATGGCCCATTTAAAGAACCTGTTATTCAGAATTATGTTAGGCAAATTGTCTCCGGACTTGCCTATCTGCATGGAAGAAACACAGTGCACCGGGACATCAAAGGGGCTAATATACTAGTTGATCCTAATGGTGAAATTAAGTTGGCGGACTTTGGAATGGCTAAACATATAAATTCTTCTACCTCCATGCTCTCTTTCAAGGGAAGTCCATATTGGATGGCACCGGAGGTTGTTATGAATACAAATGGCTACAATCTTGCTGTGGATATATGGAGCTTGGGATGCACAATTCTGGAAATGGCGACATCAAAACCTCCATGGAGTCAGTATGAAGGGGTGGCTGCTATTTTTAAAATTGGAAACAGCAAAGATATGCCTGACATCCCGGAGCATCTTTCAAATGATGCCAAGTCTTTCATACAGCTATGCTTACAAAGAGATCCTTCAGCTCGCCCAAGTGCTCAAAGGTTGCTTGAGCATCCCTTTATTCGTGATCAATCTGCGACAAGAGCTGCCAATGTCAGCTTAACCAGAGATGCTTTCCCCTACATGTTTGATGGAAGCCGGACTCCGCCACATGCAGAGCTTCATTCCAGTAGAACAAATATGACGTCAGTGGATGGAGATTATGCAACAAAGCCAACTTTTGCAGCTTCACGAGCATTGAGGAGCCCAAGAGATAACACAAGAATGATTACATCTTTACCAGTATCTCCCTGCTCAAGTCCATTGCGGCAACATGGATCAGCATACAAGAGCTGTATGCTTTCTCCTCCACATCCAACTTACACCACGGTGGGACAAAATACCTACAATTTCAACGATCTCTCTTCATATCCAGTGAGATCAAACGCCACCTTCACTTTAGATCCTTGGAATGAGAGATCCCTATACAACGCCCATACACCTGGCGGGTCCCCAAGAAGGAGACTCATTTGA 1929 0.4593 MPAWWGRKSSKNKEEQRQQQLPQPESHGGIQFNFIKSPIRNGAKKGRDKPKSFDEVSTAMLSRSSPRASRDFTPSAAAPVGGSSSGFSCLDSDGGEKIGLPLPRPSVSSPQSLGNDQGDGDGLGSASISGSSVSSSGSYDHHPISQFDVIRGRGDMKINMRSKSPGPGSRGPTSPTSPLHPRLHVLSIDSPTGKQDDGRSECHPLPLPPGSPTSPSALSNARINSLLENTTNNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVFSDDQTSKECLKQLNQEINLLSSLSHPNIVEYYGSELGEDTLSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYVRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPYWMAPEVVMNTNGYNLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPDIPEHLSNDAKSFIQLCLQRDPSARPSAQRLLEHPFIRDQSATRAANVSLTRDAFPYMFDGSRTPPHAELHSSRTNMTSVDGDYATKPTFAASRALRSPRDNTRMITSLPVSPCSSPLRQHGSAYKSCMLSPPHPTYTTVGQNTYNFNDLSSYPVRSNATFTLDPWNERSLYNAHTPGGSPRRRLI 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4816g00043 642 ProSitePatterns Protein kinases ATP-binding region signature. 243 266 IPR017441 GO:0005524
Pral4816g00043 642 SUPERFAMILY Protein kinase-like (PK-like) 234 563 IPR011009 -
Pral4816g00043 642 ProSiteProfiles Protein kinase domain profile. 237 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4816g00043 642 Gene3D Transferase(Phosphotransferase) domain 1 234 514 - -
Pral4816g00043 642 Pfam Protein kinase domain 238 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4816g00043 642 SMART serkin_6 237 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4816g00043 642 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 502 - -
Pral4816g00043 642 MobiDBLite consensus disorder prediction 57 71 - -
Pral4816g00043 642 FunFam Mitogen-activated protein kinase kinase kinase 235 517 - -
Pral4816g00043 642 MobiDBLite consensus disorder prediction 105 142 - -
Pral4816g00043 642 MobiDBLite consensus disorder prediction 1 218 - -
Pral4816g00043 642 CDD STKc_MEKK1_plant 236 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4816g00043 Pral-Chr4816 193818 199519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4816g00043 1 556 MAP Kinase Kinase Kinase AT1G53570 57.923 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4816g00043 Pkinase 6.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4816g00043 K04421 - qsa:O6P43_030333 902.123