Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4816g00041 ATGACGAAAACGAAAAAATTGATACCGGGATTTCGGTTTCATCCGACTGACGTTGAGCTGGTTCAGTACTTTTTGAAGAGGAAGGTCATCGGAAAAAAGTTTCCCGTTGAAGTGATTGCCGAAGTCGACATATACAAATACGCTCCGTGGGATCTCCCAGATAAATCTTTACTGAGCACTGAGGATTTGGAATGGTATTTCTTTTGCCCTAGAGCAAAGAAATACGCCATTGGAGGTAGAATGAATAGGAGTACGGAAGTAGGATATTGGAAAACCACAGGAAGGGATAAACCTATTTGGCACAATAATCAAACTGTGGGGATGATGAAAACTCTAGTGTTTCACATGGGTCGACCTCCTAAAGGACGTCGAACTGACTGGGTTATGCATGAATTTAGGCTTGATCAGGATCTCGCTCACAAAGGCATCGCACAGGACTCCTATGTGCTTTGTAGGGTGTGCAAGAAGGATGGTCCTGGTCCTAGAAATGGAGGACAGTATGGTAAACTGTTTGACGAGGAAAACTGGGATGATGAGGAAGATAAAACTGATGGCGTCTGTTCTATTTCTATTGCTAAACCACTTCCCATTCTGCCTATTGCACATAATCATAATAATAATAATTTCTCACCTTGTGGACGCAACTGGTCGATTCCAAAGTCAACTTTGTCATCAGGAGCGACTAATCCTTCACCAGTGAATACCGATGTGTCATGCTCGTTAGATTATTTCGCAGAAGAAGAATACAGCACATTATTATTGGCTCTAAATGGAAGCAACAATATGGAGACGGACGTTAATTCTGAGGAGAAAAAAGAAAGTGAGGGCATTGCATTTGATGAGATTTTTGGGGACTTGGAAGACCTCATCAACATGGCTGCATTTGATGAAGATGATGATCGACTTCCCTCATGTTTCCCCAAAAGCTACATTTCCTACAAACCCAAATGA 951 0.4206 MTKTKKLIPGFRFHPTDVELVQYFLKRKVIGKKFPVEVIAEVDIYKYAPWDLPDKSLLSTEDLEWYFFCPRAKKYAIGGRMNRSTEVGYWKTTGRDKPIWHNNQTVGMMKTLVFHMGRPPKGRRTDWVMHEFRLDQDLAHKGIAQDSYVLCRVCKKDGPGPRNGGQYGKLFDEENWDDEEDKTDGVCSISIAKPLPILPIAHNHNNNNFSPCGRNWSIPKSTLSSGATNPSPVNTDVSCSLDYFAEEEYSTLLLALNGSNNMETDVNSEEKKESEGIAFDEIFGDLEDLINMAAFDEDDDRLPSCFPKSYISYKPK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4816g00041 316 Gene3D NAC domain 16 158 IPR036093 GO:0003677|GO:0006355
Pral4816g00041 316 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 228 - -
Pral4816g00041 316 FunFam Nac domain-containing protein 86 16 159 - -
Pral4816g00041 316 Pfam No apical meristem (NAM) protein 9 134 IPR003441 GO:0003677|GO:0006355
Pral4816g00041 316 SUPERFAMILY NAC domain 6 156 IPR036093 GO:0003677|GO:0006355
Pral4816g00041 316 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4816g00041 Pral-Chr4816 169311 171035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4816g00041 1 184 NAC Transcription Factor Family AT5G09330 62.703 4.79e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4816g00041 NAM 5.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4816g00041 - - adu:107470479 297.745