Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4816g00012 ATGAGTGGGATGGATTATGAGCTAGTTGATCACTCCTTCTGCCCCTCCCACATGTATCAACTCCATGAATATAGCTCAGAAAATGCATTTCCATTCCAGACAGAGTATTGTCCAAATACCTCACAAGATGTGGTGCTCGATCAAGAGTTTATTAAAGGATTACTACAGCAGCCACATACAGAGCTTCTGGACTTCGATTTGATGGATCCTAATGTCCCCGTGGGGACAGAGACAGAATTGAACCAAGAAGTTACTACTCCGAGATGCCAGGAAAATGGCGATCCTTGTTTAATGGGAATTCAAGCTGCGCTAATGGAAGATAGCAGTTTAGCTGATCTCTTGCTGACAGGGGCTGAAGCTGTTGAAGCACAGAACTGGGCTCTAGCATCAGACATCATTAAGAAGATTAACGACGACTTGTGTGTAGAAAGTGGGGATAGTTTATTGAACAGGTTGGCTCTTTTCTTTACTCAAGGTCTGCATTGTAAAACCATAAACGCTCCTGCGGTGAACCATGAGCCTGTTTCTACCCAGACAAACACTTTCTTCACCTTTCAGATTCTCCAGGAGCTCTCTCCCTATGTGAAATTTGCTCATTTTACAGCCAACCAAGCGATCTTTGAAGCCACTGAAGATGATCGAGAGATCCATGTCATCGATTTTGACATCACGGAGGGGATCCAGTGGCCGCCTTTGATGGTTGACCTTGCAATGAGGAAGAACACCACCCTCAGAGTAACAGCCATCACATTGGACCATCAAAGTGCCGCCGTCGCCCAACAAACGGGAAGAAGATTACAAGAGTTTGCTGCTTCTATCAATTTCTCATTCACATTCGATCAAATAATGATCACTAGGGAAGAAGATTTTCGAAGAATCATATTGCGTCATACACTTATAGTCAATTGTATGATACACCAGTGGATGCCCAGCAGGAGTTTCTCGCAGATCAAAACTTTCCTGGATGGCGTCAGCAAATTATCACCTAAACTTGTTATTTTAGTAGAAGATGAACTGTTCAATTTTTCTAGGCTTAAATCCATGTCCTTTGTGGAGTTCTTCTATGAGGCTTTGCATCATTATACAGCAATTTCTGATTCACTTGAAAGTAGTTTCTGGGACGACTACAAGATGAAGTTGATAGAAAAAGAAGTTCTGGGGATTAGGATTATAGACAGTGTGAGGCAGTTTCCTTGTGAAAGGGAGGAGAGAACTTTGTGGGAAGAAGGATTGAATTCCTTGAAAGGGTTTAAACGAGTTCCTGTGAGTACGTGCAATATTTCTCAAGCCAAGTTCTTGGTGAGCCTCTTCGGTGGAGGCTATTCGGTGCAATATGACAAGCGCAGATTGTCTCTTTGTTGGAAGTCTACGCCTTTAACAGCTGCCTCAATCTGGGTACCGACAAGAAGTTAA 1413 0.431 MSGMDYELVDHSFCPSHMYQLHEYSSENAFPFQTEYCPNTSQDVVLDQEFIKGLLQQPHTELLDFDLMDPNVPVGTETELNQEVTTPRCQENGDPCLMGIQAALMEDSSLADLLLTGAEAVEAQNWALASDIIKKINDDLCVESGDSLLNRLALFFTQGLHCKTINAPAVNHEPVSTQTNTFFTFQILQELSPYVKFAHFTANQAIFEATEDDREIHVIDFDITEGIQWPPLMVDLAMRKNTTLRVTAITLDHQSAAVAQQTGRRLQEFAASINFSFTFDQIMITREEDFRRIILRHTLIVNCMIHQWMPSRSFSQIKTFLDGVSKLSPKLVILVEDELFNFSRLKSMSFVEFFYEALHHYTAISDSLESSFWDDYKMKLIEKEVLGIRIIDSVRQFPCEREERTLWEEGLNSLKGFKRVPVSTCNISQAKFLVSLFGGGYSVQYDKRRLSLCWKSTPLTAASIWVPTRS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4816g00012 470 ProSiteProfiles GRAS family profile. 101 466 IPR005202 -
Pral4816g00012 470 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 97 461 IPR005202 -
Pral4816g00012 470 Pfam GRAS domain family 111 465 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4816g00012 Pral-Chr4816 46502 48070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4816g00012 110 465 GRAS Transcription Factor Family AT5G17490 31.367 4.58e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4816g00012 GRAS 3.1e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4816g00012 - - gmx:100804613 607.446