Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4814g00043 ATGGGCTGCGTCAACACCAAGCTTTCTCCCTCTCGCAACGAGAGGTGGAAACGGGACCATGGCTATGGAAGTCAAAACAGGGCGGCCAAACACACGAGTCGAGGCTATTATTATCAGAAGCCACTTTCCGACAAGGTACAACATAGGATTTCAACTTCAAGAACAGCAGAAAATGGCGGTGGTGGTGTCAGAGAAGAAGCGGGAGGAGAAAGGTTGGCTCCTGGGGCCGAGAGGGATGAGGTTGGCAATATTTCAAGGAGATTTGAGGACAAGAAGATTGGAAAAGATGTGTATGTGGGTGCTTGGCCGAAGTGGTTGGTTGATAATATACCTGCGCATGTTCTGGATAAGCTGGTTCCCAAGAGTGCTGATTGTTATGAAAAGCTTGCCAAGATAGGACGTGGAACATATAGCAACGTGTACAAAGCCAGAGAGAAGGCAGCGGGAAAGATTGTTGCCATGAAGAAGGTCCGGTTTGACACATCGGATGCAGAAAGTATAAAGTTCATGGCGAGAGAAATCATGATTCTGCAGAAGCTGGACCATCCCAATGTTATCAAGCTTGAAGGCATAGCCACCTCAAGGATGCAGTATAGTCTCTACCTAGTCTTCGATTACATGCAGTCCGACCTTACCCGAGTCATCACCCGCCCTGGCGAGAAACTCACTGAACCACAGATTAAGTGTTACATGCAGCAATTGCTTTCTGGACTCCAGCATTGCCATGAGAGGGGGGTTATGCACAGAGACGTAAAAGCTTCAAACTTGCTAATAGACAAGAAAGGGATGCTAAAAGTTGCAGATTTCGGGCTGGCAAATTCCTTTGATCTTAAACCACAAGGGCCTTTCACCAATCGAGTGGTGACACTCTGGTATAGAGCCCCTGAATTACTTTTGGGTTCAACTGATTATGGATTCGCCATCGATCTCTGGAGTGCTGGATGCCTCTTGGCTGAGATGTTTCTTGGAAAACCAATCATGCCTGGCAGGACTGAGGTTGAACAAATGCACATGATCTTCAAACTATGTGGTTCTCCAACGGAGGATTACTGGAAGAAATTGAAGCTAATGACAAGTTATAGGCCACCAAACTACAAGCCTAATTATGATGAAATATTCAGGGCTTTTCCTCCCTCTTCTATTGGTCTCTTAACTACGCTTCTGGATCTTGATCCTAACTATCGTGGCACTGCTGCCTCTGCTCTCCAGTCTGAATTCTTCAAGACTAGTCCTTTACCATGCCCTCCTTCAGCTCTACCGGTAATATTCAAAGAGAAGGATGAGCGCTCACATCCTAAAGGACGCAAAAAGCATAGGTCATCCAAGAAAGGACAAATACCCCAGCCAAGTAACGCGACTCGGTCAGAAAAGAACAAAATTGCCGCCGGACAACAAGTCGTGAGAAATTCAGAATCCTCGAAAGAGAAGAAGAATGTGGAAGGAAGCATGTCTGATGTAGAAACGGGAAATAGTCTAAGCGGCACATCATCGAACTCGAAACAATATACCACAGAAGGGAGCTTGAATACGTCACTGACTCTGTCTCCAGTTTTTCTGTCCAGTGGTGAGAAAAGATCTCCCAGGACTGAAGCACATCCCAATGCTCTCAAAAACGTCAAGAACTATAGCAGCTACTTGCAGGCCATGATGAATGGCAAAGAAGGCAGTGACCCAGCTCAATTTCGCCGATCCTTTTCTCTTGTGGATTATCGGTTTGATCCGGATAAGTTATCTAATCTCATTGAATTAAATAAGAGGTTGGGCAATCGAAATTGA 1776 0.4578 MGCVNTKLSPSRNERWKRDHGYGSQNRAAKHTSRGYYYQKPLSDKVQHRISTSRTAENGGGGVREEAGGERLAPGAERDEVGNISRRFEDKKIGKDVYVGAWPKWLVDNIPAHVLDKLVPKSADCYEKLAKIGRGTYSNVYKAREKAAGKIVAMKKVRFDTSDAESIKFMAREIMILQKLDHPNVIKLEGIATSRMQYSLYLVFDYMQSDLTRVITRPGEKLTEPQIKCYMQQLLSGLQHCHERGVMHRDVKASNLLIDKKGMLKVADFGLANSFDLKPQGPFTNRVVTLWYRAPELLLGSTDYGFAIDLWSAGCLLAEMFLGKPIMPGRTEVEQMHMIFKLCGSPTEDYWKKLKLMTSYRPPNYKPNYDEIFRAFPPSSIGLLTTLLDLDPNYRGTAASALQSEFFKTSPLPCPPSALPVIFKEKDERSHPKGRKKHRSSKKGQIPQPSNATRSEKNKIAAGQQVVRNSESSKEKKNVEGSMSDVETGNSLSGTSSNSKQYTTEGSLNTSLTLSPVFLSSGEKRSPRTEAHPNALKNVKNYSSYLQAMMNGKEGSDPAQFRRSFSLVDYRFDPDKLSNLIELNKRLGNRN 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4814g00043 591 FunFam Putative serine/threonine-protein kinase 209 445 - -
Pral4814g00043 591 SUPERFAMILY Protein kinase-like (PK-like) 121 414 IPR011009 -
Pral4814g00043 591 MobiDBLite consensus disorder prediction 1 78 - -
Pral4814g00043 591 MobiDBLite consensus disorder prediction 11 25 - -
Pral4814g00043 591 MobiDBLite consensus disorder prediction 483 508 - -
Pral4814g00043 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Pral4814g00043 591 MobiDBLite consensus disorder prediction 424 508 - -
Pral4814g00043 591 ProSiteProfiles Protein kinase domain profile. 126 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4814g00043 591 FunFam probable serine/threonine-protein kinase At1g54610 113 208 - -
Pral4814g00043 591 CDD STKc_CDK9_like 126 407 - -
Pral4814g00043 591 Gene3D Transferase(Phosphotransferase) domain 1 209 447 - -
Pral4814g00043 591 SMART serkin_6 126 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4814g00043 591 Gene3D Phosphorylase Kinase; domain 1 114 208 - -
Pral4814g00043 591 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Pral4814g00043 591 Pfam Protein kinase domain 126 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4814g00043 591 PANTHER CELL DIVISION PROTEIN KINASE 124 413 - -
Pral4814g00043 591 MobiDBLite consensus disorder prediction 444 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4814g00043 Pral-Chr4814 186740 190174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4814g00043 121 443 Core Cell Cycle Gene Families AT5G10270 48.256 4.69e-101 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral4814g00043 Pkinase 5.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4814g00043 K08819 - gmx:100782603 660.218