Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4814g00018 ATGGCAGGGAAGAGAAATAACCAAACCAGTCCTGTGGGAAGCCCAACTTCTGGGAACATCTCAGACAGCTCTTCCAAAGAACAAGACAGGTTCCTCCCCATCGCCAACGTTAGCCGTATCATGAAAAGGGCACTTCCAGCTAATGCCAAAATCTCCAAGGAAGCGAAAGAGACAGTTCAGGAATGTGTGTCTGAGTTCATAAGCTTCATCACGGGTGAAGCATCCGACAAGTGCCAGAGAGAGAAGAGGAAGACAATCAACGGCGACGATCTTCTGTGGGCTATGACAACGTTGGGGTTCGAGAACTATGTTGGACCCTTGAAGGTGTACCTCAACAACTACAGGGAAACAGAGGGAGACAAGAGTTGTGTTGGTACCAGGCAAGAAGATCAGGCTCAGGCAGAAACAAATGACGGGGTCGCCGAGCTCAACAGGCTGGCTAATTCTGTGTCAGCTAAATCAGATCTTGCCGGTTTTAATGGTGCGTTTTACTCTGTTATGCCTGAGGTTGCTCCAAAGAGCTTTGCAGAGATAGGAGGGCTCACTGGCTTCAGAGAGAACCCCATGAGCATAGCTATTGCCCAGAATGCAGTTCATAACGACGCAGATGGAAACCTGCGTTACAGGGTTGAATGGTAG 639 0.4914 MAGKRNNQTSPVGSPTSGNISDSSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNNYRETEGDKSCVGTRQEDQAQAETNDGVAELNRLANSVSAKSDLAGFNGAFYSVMPEVAPKSFAEIGGLTGFRENPMSIAIAQNAVHNDADGNLRYRVEW 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4814g00018 212 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Pral4814g00018 212 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Pral4814g00018 212 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Pral4814g00018 212 SUPERFAMILY Histone-fold 28 137 IPR009072 GO:0046982
Pral4814g00018 212 FunFam Nuclear transcription factor Y subunit B-3 20 143 - -
Pral4814g00018 212 Gene3D Histone, subunit A 18 155 IPR009072 GO:0046982
Pral4814g00018 212 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Pral4814g00018 212 MobiDBLite consensus disorder prediction 1 28 - -
Pral4814g00018 212 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pral4814g00018 212 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 14 139 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4814g00018 Pral-Chr4814 87776 88797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4814g00018 22 131 CCAAT-HAP3 Transcription Factor Family AT4G14540 82.727 6.88e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pral4814g00018 CBFD_NFYB_HMF 1.1e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4814g00018 K08065 - gmx:100810059 294.278